RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 BHLHA15Q7RTS1 189 aaPredicted RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 SNX20Q7Z614 316 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 RTN4RL2Q86UN3 420 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ZNF589Q86UQ0 364 aaPredicted RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 TMEM17Q86X19 198 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 RALGPS2Q86X27 583 aaPredicted RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 DCP2Q8IU60 420 aaKnown RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ZDHHC21Q8IVQ6 265 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 SIRT2Q8IXJ6 389 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 SPAG16Q8N0X2 631 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 METTL4Q8N3J2 472 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 FAM109AQ8N4B1 249 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MARVELD2Q8N4S9 558 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 FAM86B1Q8N7N1 296 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 TC2NQ8N9U0 490 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 STEAP2Q8NFT2 490 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 OR9K2Q8NGE7 335 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 OR4A15Q8NGL6 344 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 OR6Y1Q8NGX8 325 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 OR2T3Q8NH03 318 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 NFKBIDQ8NI38 313 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 NEK7Q8TDX7 302 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 GRHL3Q8TE85 626 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 GIPC3Q8TF64 312 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 SEMA4DQ92854 862 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MAP4K1Q92918 833 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 RAB1CQ92928 201 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 CD101Q93033 1021 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MARC2Q969Z3 335 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 EXOSC8Q96B26 276 aaKnown RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 CCDC124Q96CT7 223 aaKnown RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 HAVCR1Q96D42 359 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 TOE1Q96GM8 510 aaKnown RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ZNF668Q96K58 619 aaPredicted RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ZNF597Q96LX8 424 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MBOAT7Q96N66 472 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 FOXN4Q96NZ1 517 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 BTBD9Q96Q07 612 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 XPO6Q96QU8 1125 aaKnown RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 HAPLN3Q96S86 360 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 PRMT1Q99873 361 aaKnown RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MCMBPQ9BTE3 642 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 TIPINQ9BVW5 301 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ALX4Q9H161 411 aaPredicted RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 RNPEPQ9H4A4 650 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 TRABDQ9H4I3 376 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ZNF768Q9H5H4 540 aaKnown RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 RXFP1Q9HBX9 757 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 CCNB1IP1Q9NPC3 277 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 TM7SF3Q9NS93 570 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 PNPOQ9NVS9 261 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MTCH1Q9NZJ7 389 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 SH3BP4Q9P0V3 963 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MARCH4Q9P2E8 410 aaPredicted RBP3.78□□□□□ -1.8
LINC01048-201ENST00000414480 WNT16Q9UBV4 365 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MAGEL2Q9UJ55 1249 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 HAO1Q9UJM8 370 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 TCFL5Q9UL49 500 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 TMPRSS11EQ9UL52 423 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 CDH7Q9ULB5 785 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ABCG2Q9UNQ0 655 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 FLVCR2Q9UPI3 526 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 SORCS3Q9UPU3 1222 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ERVW-1Q9UQF0 538 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ZDHHC9Q9Y397 364 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 RHBDD3Q9Y3P4 386 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 PKP3Q9Y446 797 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 ASB4Q9Y574 426 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 SLC22A7Q9Y694 548 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 NFS1Q9Y697 457 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 FOCADQ5VW36 1801 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MICAL3Q7RTP6 2002 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 BPTFQ12830 3046 aa3.78□□□□□ -1.8
LINC01048-201ENST00000414480 MN1Q10571 1320 aaPredicted RBP3.77□□□□□ -1.81
LINC01048-201ENST00000414480 NRCAMQ92823 1304 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 CACNA1IQ9P0X4 2223 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 A0A0A6YYC8 382 aaPredicted RBP3.77□□□□□ -1.81
LINC01048-201ENST00000414480 A0A1W2PPQ1 181 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 A0A1W2PRB8 838 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 PLSCR5A0PG75 271 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 SH3PXD2BA1X283 911 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 TMEM191CA6NGB0 347 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 GLOD5A6NK44 160 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 C4orf47A7E2U8 309 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 EFCAB8A8MWE9 144 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 FAM25AB3EWG3 89 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 FAM25CB3EWG5 89 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 FAM25GB3EWG6 89 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 C2CD4DB7Z1M9 353 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 F8WDY8 70 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 SMLR1H3BR10 107 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 CCDC188H7C350 402 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 TRIM77I1YAP6 450 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 I3L1I5 382 aaPredicted RBP3.77□□□□□ -1.81
LINC01048-201ENST00000414480 hCG_2039718K7EN88 272 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 GFRA2O00451 464 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 PEX12O00623 359 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 SLC30A4O14863 429 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 ADAMDEC1O15204 470 aa3.77□□□□□ -1.81
LINC01048-201ENST00000414480 MID1O15344 667 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms