RNA–Protein interactions for RNA: ENST00000414367.5

PCDH15-216, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 3,357 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-216ENST00000414367 VPS35Q96QK1 796 aa6.38□□□□□ -1.39
PCDH15-216ENST00000414367 SLC12A9Q9BXP2 914 aa6.38□□□□□ -1.39
PCDH15-216ENST00000414367 ADNPQ9H2P0 1102 aa6.38□□□□□ -1.39
PCDH15-216ENST00000414367 SOX17Q9H6I2 414 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-216ENST00000414367 SPAG4Q9NPE6 437 aa6.38□□□□□ -1.39
PCDH15-216ENST00000414367 POLG2Q9UHN1 485 aa6.38□□□□□ -1.39
PCDH15-216ENST00000414367 DNMT3AQ9Y6K1 912 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-216ENST00000414367 AP1M2Q9Y6Q5 423 aa6.38□□□□□ -1.39
PCDH15-216ENST00000414367 TRBV5-3A0A0A0MS03 114 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 FAM95CA0A1B0GW59 222 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 BLACEA4D250 179 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 TRPC5OSA6NMA1 111 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 H3BMM5 538 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 AIM2O14862 343 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 PHGDHO43175 533 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 DPM1O60762 260 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 IPO13O94829 963 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 NCF2P19878 526 aaPredicted RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 FOXA1P55317 472 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ARG2P78540 354 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 NKAIN1Q4KMZ8 207 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 KLC3Q6P597 504 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 BLOC1S3Q6QNY0 202 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 C11orf96Q7Z7L8 435 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 CUZD1Q86UP6 607 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 DNAJB14Q8TBM8 379 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 CNBD2Q96M20 576 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 SERPINI1Q99574 410 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 PRPF18Q99633 342 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 NRTNQ99748 197 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 RHBGQ9H310 441 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ZNF768Q9H5H4 540 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 C8orf4Q9NR00 106 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 MRGBPQ9NV56 204 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 KCNMB2Q9Y691 235 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 MUC22E2RYF6 1773 aaPredicted RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 hCG_2014768A0A024R1R8 64 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 C21orf140B9A014 251 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 BTN3A1O00481 513 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 CD3EAPO15446 510 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ALOX12BO75342 701 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 EEDO75530 441 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 RPS17P08708 135 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 IDO1P14902 403 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ACRV1P26436 265 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 GRK3P35626 688 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 STT3AP46977 705 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ARSDP51689 593 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 FOXL2P58012 376 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 HERVK_113P63132 956 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 PMS2P3Q13401 168 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 TGFBIQ15582 683 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ZC3H12BQ5HYM0 836 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ANKRD26P1Q6NSI1 321 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 SUSD1Q6UWL2 747 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 DLEU7Q6UYE1 221 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 DPP10Q8N608 796 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 CEP70Q8NHQ1 597 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 MCOLN3Q8TDD5 553 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 PEX13Q92968 403 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 CCDC115Q96NT0 180 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 MBOAT4Q96T53 435 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 EGFL8Q99944 293 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ERVK-6Q9BXR3 956 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 GPR87Q9BY21 358 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 TRIM54Q9BYV2 358 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 SPRTNQ9H040 489 aaPredicted RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 C20orf96Q9NUD7 363 aaPredicted RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ACTR3BQ9P1U1 418 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 EPHA6Q9UF33 1036 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 GNPTGQ9UJJ9 305 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 MID2Q9UJV3 735 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 TCFL5Q9UL49 500 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 SRPK3Q9UPE1 567 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 B3GNT3Q9Y2A9 372 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 TOX3O15405 576 aaPredicted RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 MAGEB3O15480 346 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 GFAPP14136 432 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 IL12AP29459 219 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 CASRP41180 1078 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 HNRNPFP52597 415 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 GRM7Q14831 915 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 OR4D1Q15615 310 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 BCL2A1Q16548 175 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ANKDD1AQ495B1 522 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 ZNF470Q6ECI4 717 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 NANOGP8Q6NSW7 305 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 IGF2-ASQ6U949 168 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 RPS27LQ71UM5 84 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 SYVN1Q86TM6 617 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 BPHLQ86WA6 291 aaPredicted RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 C19orf47Q8N9M1 422 aaKnown RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 SMYD1Q8NB12 490 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 OR2T11Q8NH01 316 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 TBC1D20Q96BZ9 403 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 MMABQ96EY8 250 aaPredicted RBP6.37□□□□□ -1.39
PCDH15-216ENST00000414367 FAR2Q96K12 515 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 TRMOQ9BU70 441 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 NLNQ9BYT8 704 aa6.37□□□□□ -1.39
PCDH15-216ENST00000414367 NANOGQ9H9S0 305 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms