RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 CPN2P22792 545 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 TIA1P31483 386 aaKnown RBP eCLIP28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 BTG2P78543 158 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 CCDC81Q6ZN84 652 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 UCN3Q969E3 161 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 TUBGCP3Q96CW5 907 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 FAM117AQ9C073 453 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 LYARQ9NX58 379 aaKnown RBP28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 MCM8Q9UJA3 840 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 PROM1O43490 865 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 HEXBP07686 556 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 IL10P22301 178 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 OTX2P32243 289 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 MDH1P40925 334 aaKnown RBP28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 HK2P52789 917 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 EMP2P54851 167 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 RPL38P63173 70 aaKnown RBP28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 BROXQ5VW32 411 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 CCT7Q99832 543 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 PCSK5Q92824 1860 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 GNG14A0A1W2PPG7 69 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 WASHC1A8K0Z3 465 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 HDAC3O15379 428 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 PRKAR1AP10644 381 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 RHAGQ02094 409 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 TUBB8Q3ZCM7 444 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 NOXRED1Q6NXP6 359 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 GALNT18Q6P9A2 607 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 MAVSQ7Z434 540 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 MMP21Q8N119 569 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 RIC8BQ9NVN3 520 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 SIRT5Q9NXA8 310 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 PHF11Q9UIL8 331 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 DLGAP4Q9Y2H0 992 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 SPACA6W5XKT8 324 aa28.79■■■□□ 2.2
CSNK1E-206ENST00000413574 ANXA4P09525 319 aaPredicted RBP28.78■■■□□ 2.2
CSNK1E-206ENST00000413574 GYS2P54840 703 aa28.78■■■□□ 2.2
CSNK1E-206ENST00000413574 TNFRSF17Q02223 184 aa28.78■■■□□ 2.2
CSNK1E-206ENST00000413574 TM4SF18Q96CE8 201 aa28.78■■■□□ 2.2
CSNK1E-206ENST00000413574 AKTIPQ9H8T0 292 aa28.78■■■□□ 2.2
CSNK1E-206ENST00000413574 MEAF6Q9HAF1 191 aa28.78■■■□□ 2.2
CSNK1E-206ENST00000413574 GLOD5A6NK44 160 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 SRRM3A6NNA2 597 aaPredicted RBP28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 ZNF195O14628 629 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 MAOAP21397 527 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 JAK1P23458 1154 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 SSPNQ14714 243 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 ATP6AP1LQ52LC2 224 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 C6orf136Q5SQH8 315 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 TSLPQ969D9 159 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 PPP3R2Q96LZ3 170 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 PFDN4Q9NQP4 134 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 VTI1BQ9UEU0 232 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 MGAQ8IWI9 3026 aa28.77■■■□□ 2.2
CSNK1E-206ENST00000413574 AIFM1O95831 613 aa28.76■■■□□ 2.2
CSNK1E-206ENST00000413574 CLNKQ7Z7G1 428 aa28.76■■■□□ 2.2
CSNK1E-206ENST00000413574 ADAMTS17Q8TE56 1095 aa28.76■■■□□ 2.2
CSNK1E-206ENST00000413574 ADAMTS18Q8TE60 1221 aa28.76■■■□□ 2.2
CSNK1E-206ENST00000413574 C16orf78Q8WTQ4 265 aa28.76■■■□□ 2.2
CSNK1E-206ENST00000413574 WDR55Q9H6Y2 383 aaPredicted RBP28.76■■■□□ 2.2
CSNK1E-206ENST00000413574 MS4A12Q9NXJ0 267 aa28.76■■■□□ 2.2
CSNK1E-206ENST00000413574 CDC14CA4D256 554 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 ZNF891A8MT65 544 aaPredicted RBP28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 SLCO1B7G3V0H7 640 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 SDHDO14521 159 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 PRMT3O60678 531 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 TACR1P25103 407 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 TAS2R50P59544 299 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 UGT8Q16880 541 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 NDUFAF5Q5TEU4 345 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 LANCL3Q6ZV70 420 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 PPP1R32Q7Z5V6 425 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 CDC26Q8NHZ8 85 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 C8orf44Q96CB5 159 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 METTL2AQ96IZ6 378 aaKnown RBP28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 PTCHD1Q96NR3 888 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 C1orf50Q9BV19 199 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 RPF2Q9H7B2 306 aaKnown RBP28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 NECTIN3Q9NQS3 549 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 PRTFDC1Q9NRG1 225 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 SEMA3GQ9NS98 782 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 HS3ST3B1Q9Y662 390 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 USH1CQ9Y6N9 552 aa28.76■■■□□ 2.19
CSNK1E-206ENST00000413574 GOLGA8QA0A0J9YX86 632 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 MYOCOSA0A1B0GUC4 107 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 GOLGA8OA6NCC3 632 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 GOLGA8NF8WBI6 632 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 TGFBR3LH3BV60 316 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 EDF1O60869 148 aaKnown RBP28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 LDB3O75112 727 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 ALOX12BO75342 701 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 MYO1DO94832 1006 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 NR2F6P10588 404 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 EPHA3P29320 983 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 BUD31P41223 144 aaPredicted RBP28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 SLC13A2Q13183 592 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 MED25Q71SY5 747 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 ZNF595Q8IYB9 648 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 FNDC5Q8NAU1 212 aa28.75■■■□□ 2.19
CSNK1E-206ENST00000413574 THOC1Q96FV9 657 aaKnown RBP28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms