RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ZNF264O43296 627 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 LRRTM2O43300 516 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 WBP4O75554 376 aaKnown RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 CTAG2O75638 210 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 NDUFA7O95182 113 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 TXNDC12O95881 172 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 RHOXF2BP0C7M4 288 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 GP1BBP13224 206 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 MYOD1P15172 320 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 EZRP15311 586 aaKnown RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 HNF1AP20823 631 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 C21orf33P30042 268 aaPredicted RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 ALDH1B1P30837 517 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 TMPOP42166 694 aaKnown RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 GRIA1P42261 906 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 HAND2P61296 217 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 TRAF1Q13077 416 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 KIR2DS5Q14953 304 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 SSX2Q16385 188 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 ZSWIM7Q19AV6 140 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 DUOXA1Q1HG43 343 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 FSCBQ5H9T9 825 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 LIPJQ5W064 366 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 TRNP1Q6NT89 227 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 CLEC2AQ6UVW9 174 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 Q6ZTK2 550 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 CENPUQ71F23 418 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 G2E3Q7L622 706 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 VPS36Q86VN1 386 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 RCOR2Q8IZ40 523 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 LRRC75A-AS1Q8N1F1 130 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 UBE2J2Q8N2K1 259 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 LRRC43Q8N309 656 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 KLHDC1Q8N7A1 406 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 RAB3IL1Q8TBN0 382 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 RAET1EQ8TD07 263 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 P3H4Q92791 437 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 PEX13Q92968 403 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 ABTB1Q969K4 478 aaPredicted RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 CASD1Q96PB1 797 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 RBM14Q96PK6 669 aaKnown RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 RHOXF2Q9BQY4 288 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 URM1Q9BTM9 101 aaKnown RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 NDUFAF3Q9BU61 184 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 LRRCC1Q9C099 1032 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 MAGT1Q9H0U3 335 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 PNNQ9H307 717 aaKnown RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 MED20Q9H944 212 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 AGPAT5Q9NUQ2 364 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 EXOC1Q9NV70 894 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 THEGQ9P2T0 379 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 LHX3Q9UBR4 397 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 EPHA6Q9UF33 1036 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 ZDHHC2Q9UIJ5 367 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 AGO1Q9UL18 857 aaKnown RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.47□□□□□ -1.69
LSM5-205ENST00000409952 RAD54L2Q9Y4B4 1467 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 KANK1Q14678 1352 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 PARD3Q8TEW0 1356 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 C5orf60A6NFR6 353 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 PCP4L1A6NKN8 68 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 LINC01548A6NM66 108 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 NPIPA2E9PIF3 369 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 TM7SF2O76062 418 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 GOT2P00505 430 aaKnown RBP4.46□□□□□ -1.7
LSM5-205ENST00000409952 CHRNA1P02708 482 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 IGHV4-30-4P0DP06 118 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SLC2A3P11169 496 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SSTR2P30874 369 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 CSTF2P33240 577 aaKnown RBP eCLIP4.46□□□□□ -1.7
LSM5-205ENST00000409952 GNL1P36915 607 aaPredicted RBP4.46□□□□□ -1.7
LSM5-205ENST00000409952 ISL1P61371 349 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 NCBP1Q09161 790 aaKnown RBP4.46□□□□□ -1.7
LSM5-205ENST00000409952 HSPA14Q0VDF9 509 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 HYAL1Q12794 435 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 NFATC2Q13469 925 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 MTX1Q13505 466 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 GPR50Q13585 617 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 CEACAM7Q14002 265 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 BCL7AQ4VC05 210 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 ATF7IP2Q5U623 682 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SLC27A4Q6P1M0 643 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 CORO6Q6QEF8 472 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SYT10Q6XYQ8 523 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 TRMT1LQ7Z2T5 733 aaKnown RBP4.46□□□□□ -1.7
LSM5-205ENST00000409952 SERINC5Q86VE9 423 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SPATA2LQ8IUW3 424 aaPredicted RBP4.46□□□□□ -1.7
LSM5-205ENST00000409952 IQCF2Q8IXL9 164 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 ZNF683Q8IZ20 524 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 PDCL2Q8N4E4 241 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 ANKFN1Q8N957 763 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 LRTM2Q8N967 370 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SEMA6DQ8NFY4 1073 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SLC2A14Q8TDB8 520 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 RAPGEF5Q92565 580 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SENP5Q96HI0 755 aaPredicted RBP4.46□□□□□ -1.7
LSM5-205ENST00000409952 VSTM2LQ96N03 204 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 DEFB118Q96PH6 123 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 TESK2Q96S53 571 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 NPY6RQ99463 290 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms