RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 MESDQ14696 234 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 C15orf59Q2T9L4 293 aaPredicted RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 SLC25A52Q3SY17 297 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 GAGE2EQ4V326 116 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 LRRC38Q5VT99 294 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 BSPRYQ5W0U4 402 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 TXNRD3NBQ6F5E7 133 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 GAGE2AQ6NT46 116 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 TMEM184AQ6ZMB5 413 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 PEX26Q7Z412 305 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 DNAJB7Q7Z6W7 309 aaPredicted RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 TAC4Q86UU9 113 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 ARHGAP18Q8N392 663 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 RASGEF1CQ8N431 466 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 VN1R2Q8NFZ6 395 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 OR13A1Q8NGR1 328 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 KIF18AQ8NI77 898 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 DQX1Q8TE96 717 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 UTP15Q8TED0 518 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 SLC44A1Q8WWI5 657 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 ARNTL2Q8WYA1 636 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 MOAP1Q96BY2 351 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 PEBP4Q96S96 227 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 CDCA3Q99618 268 aaPredicted RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 GFI1Q99684 422 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 CNPY3Q9BT09 278 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 TRIM62Q9BVG3 475 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 TRMT61BQ9BVS5 477 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 ZNF334Q9HCZ1 680 aaPredicted RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 EIF2B3Q9NR50 452 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 ABCC13Q9NSE7 274 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 ZFP57Q9NU63 452 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.03□□□□□ -1.76
CLK1-203ENST00000409769 CLIC5Q9NZA1 410 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 OGFRQ9NZT2 677 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 GAGE2DQ9UEU5 116 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 STAP1Q9ULZ2 295 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 SNX12Q9UMY4 172 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 R3HDM2Q9Y2K5 976 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 ASB3Q9Y575 518 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 SAR1BQ9Y6B6 198 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 SPTBN5Q9NRC6 3674 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 MYO18AQ92614 2054 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 SHROOM3Q8TF72 1996 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 ZNF487B1APH4 448 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 PRRG1O14668 218 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CAPN9O14815 690 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 SPOPO43791 374 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 FGF17O60258 216 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 GPC4O75487 556 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CSPG5O95196 566 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CRYAAP02489 173 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 RNF224P0DH78 156 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 TCP1P17987 556 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 ANXA7P20073 488 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 RDXP35241 583 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 CCR2P41597 374 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 AIF1P55008 147 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 PHEXP78562 749 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CDC16Q13042 620 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 RBBP5Q15291 538 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 RPS6KA1Q15418 735 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 DPYSL2Q16555 572 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 TAZQ16635 292 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CDO1Q16878 200 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 PPM1LQ5SGD2 360 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 PDSS1Q5T2R2 415 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 OR7E24Q6IFN5 339 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 C19orf48Q6RUI8 117 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 ZNF852Q6ZMS4 543 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CHST9Q7L1S5 443 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 SLC9B2Q86UD5 537 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 ITIH5Q86UX2 942 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 VSIG1Q86XK7 387 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 PSTKQ8IV42 348 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 KATNAL2Q8IYT4 538 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CCDC185Q8N715 623 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 ACTRT1Q8TDG2 376 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 FAM172AQ8WUF8 416 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 TEKT4Q8WW24 435 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 RAPGEF5Q92565 580 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CASP10Q92851 521 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 FBXO32Q969P5 355 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 NTAN1Q96AB6 310 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 PHF21AQ96BD5 680 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 ZNF707Q96C28 371 aaPredicted RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 FAF2Q96CS3 445 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 MRPL38Q96DV4 380 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 ELMOD3Q96FG2 381 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 NUDCD1Q96RS6 583 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 SEMA3CQ99985 751 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CHCHD6Q9BRQ6 235 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 SNRNP25Q9BV90 132 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 CARD9Q9H257 536 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 PLK3Q9H4B4 646 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 PIGVQ9NUD9 493 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 ARHGEF38Q9NXL2 777 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 RCC2Q9P258 522 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 UXTQ9UBK9 157 aaPredicted RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 FBXL17Q9UF56 701 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms