RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ZRSR2Q15696 482 aaKnown RBP13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 UAP1Q16222 522 aaPredicted RBP13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 PFKFB4Q16877 469 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 TSNAXIP1Q2TAA8 658 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 KHDRBS2Q5VWX1 349 aaKnown RBP13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 OR4C11Q6IEV9 310 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 TEX9Q8N6V9 391 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 ACOT4Q8N9L9 421 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 OR14A16Q8NHC5 309 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 SLC44A1Q8WWI5 657 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 IFT81Q8WYA0 676 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 TANKQ92844 425 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 EXT2Q93063 718 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 ISL2Q96A47 359 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 ALOXE3Q9BYJ1 711 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 ACTR8Q9H981 624 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 PNO1Q9NRX1 252 aaKnown RBP13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 NINJ2Q9NZG7 142 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 SUCOQ9UBS9 1254 aaKnown RBP13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 ZNF180Q9UJW8 692 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 PPT2Q9UMR5 302 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 KLF13Q9Y2Y9 288 aaPredicted RBP13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 NAV2Q8IVL1 2488 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 FOXE1O00358 373 aaPredicted RBP13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 LCE2BO14633 110 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 DYRK3O43781 588 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 NME2P1O60361 137 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 SLC25A12O75746 678 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 ALDOAP04075 364 aaKnown RBP13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 PCNAP12004 261 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 NME2P22392 152 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 CUL3Q13618 768 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 BMPR2Q13873 1038 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 MAPKAPK3Q16644 382 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 FBXO48Q5FWF7 155 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 ZCCHC7Q8N3Z6 543 aaKnown RBP13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 TMEM156Q8N614 296 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 CEP112Q8N8E3 955 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 L3MBTL4Q8NA19 623 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 OR5L2Q8NGL0 311 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 KIF18AQ8NI77 898 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 KCTD4Q8WVF5 259 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 ZNF592Q92610 1267 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 RBM18Q96H35 190 aaKnown RBP13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 GPR137Q96N19 417 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 GPR78Q96P69 363 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 IPPKQ9H8X2 491 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 PRM3Q9NNZ6 103 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 DMGDHQ9UI17 866 aaKnown RBP13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 PHF11Q9UIL8 331 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 CLDN16Q9Y5I7 305 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 ICE1Q9Y2F5 2266 aa13.56□□□□□ -0.24
NIF3L1-205ENST00000409588 A0A087WUV0 522 aaPredicted RBP13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 A0A0G2JN53 185 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 A8MUA0 341 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 STX16-NPEPL1H3BU86 382 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 STX16O14662 325 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 TGFB1P01137 390 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 IFNA16P05015 189 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 COX7A2P14406 83 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 MST1P26927 711 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 CERS1P27544 350 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 CA7P43166 264 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 MAGEA12P43365 314 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 GTF2H2Q13888 395 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 GTF2H2CQ6P1K8 395 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 HSDL2Q6YN16 418 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 GALNTL5Q7Z4T8 443 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 UBE3DQ7Z6J8 389 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 LCA5Q86VQ0 697 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 EID3Q8N140 333 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 KIF2BQ8N4N8 673 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 HUS1BQ8NHY5 278 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 MRRFQ96E11 262 aaKnown RBP13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 VPS11Q9H270 941 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 CDC42EP4Q9H3Q1 356 aaKnown RBP13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 RUBCNLQ9H714 662 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 TIMMDC1Q9NPL8 285 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 KLHL1Q9NR64 748 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 ANKRD10Q9NXR5 420 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 FBXW2Q9UKT8 454 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 ASB1Q9Y576 335 aa13.55□□□□□ -0.24
NIF3L1-205ENST00000409588 TRBV11-1A0A0K0K1C0 115 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 ASNA1O43681 348 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 MAN1A2O60476 641 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 SMIM24O75264 130 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 ITGA10O75578 1167 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 CLDN9O95484 217 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 ACSL3O95573 720 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 TNNI3P19429 210 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 AGAP20933 346 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 CPN2P22792 545 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 BUD31P41223 144 aaPredicted RBP13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 SSR2P43308 183 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 SSR4P51571 173 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 RAP1GDS1P52306 607 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 KCNK10P57789 538 aa13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 SRSF11Q05519 484 aaKnown RBP13.54□□□□□ -0.24
NIF3L1-205ENST00000409588 SLAMF1Q13291 335 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms