RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 HPRP00739 348 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 SEMG1P04279 462 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 FABP3P05413 133 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 SLC35G6P0C7Q6 338 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 PXNP49023 591 aaPredicted RBP17.99■□□□□ 0.47
USP39-202ENST00000409025 BIRC2Q13490 618 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 MLC1Q15049 377 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 ZNF630Q2M218 657 aaPredicted RBP17.99■□□□□ 0.47
USP39-202ENST00000409025 SLC36A3Q495N2 470 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 SPDYE7PQ495Y7 208 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 SAXO2Q658L1 398 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 Q7L0L9 218 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 GJD3Q8N144 294 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 CYGBQ8WWM9 190 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 UCN3Q969E3 161 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 GAL3ST3Q96A11 431 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 NEURL3Q96EH8 262 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 TPD52L3Q96J77 140 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 FCRL4Q96PJ5 515 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 TMEM121BQ9BXQ6 578 aaPredicted RBP17.99■□□□□ 0.47
USP39-202ENST00000409025 PCED1AQ9H1Q7 454 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 PADI4Q9UM07 663 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 NOBOXO60393 691 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 CERS1P27544 350 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 AQP1P29972 269 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 IST1P53990 364 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 DSTNP60981 165 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 CYBRD1Q53TN4 286 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 FCRL6Q6DN72 434 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 SPESP1Q6UW49 350 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 VTCN1Q7Z7D3 282 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 RBM12BQ8IXT5 1001 aaKnown RBP17.98■□□□□ 0.47
USP39-202ENST00000409025 FAM46DQ8NEK8 389 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 NFKBIDQ8NI38 313 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 ZDHHC1Q8WTX9 485 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 THAP11Q96EK4 314 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 ZNF696Q9H7X3 374 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 CD320Q9NPF0 282 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 SLC35C2Q9NQQ7 365 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 PNPLA3Q9NST1 481 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 HRASLS2Q9NWW9 162 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 LYARQ9NX58 379 aaKnown RBP17.98■□□□□ 0.47
USP39-202ENST00000409025 FBXW2Q9UKT8 454 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 A0A1W2PR48 441 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 PLOD2O00469 737 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 MAP3K13O43283 966 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 ALPLP05186 524 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 CD38P28907 300 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 NTSP30990 170 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 CAPGP40121 348 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 BTN3A2P78410 334 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 CDK6Q00534 326 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 SFTPA2Q8IWL1 248 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 ZC3H7AQ8IWR0 971 aaKnown RBP17.98■□□□□ 0.47
USP39-202ENST00000409025 SLC30A8Q8IWU4 369 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 KCT2Q8NC54 265 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 CADM4Q8NFZ8 388 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 ZFP28Q8NHY6 868 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 OR2A5Q96R48 311 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 LRRC61Q9BV99 259 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 TM9SF3Q9HD45 589 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 SIRT3Q9NTG7 399 aaPredicted RBP17.98■□□□□ 0.47
USP39-202ENST00000409025 ATG4BQ9Y4P1 393 aa17.98■□□□□ 0.47
USP39-202ENST00000409025 MAGED1Q9Y5V3 778 aaPredicted RBP17.98■□□□□ 0.47
USP39-202ENST00000409025 A0A0J9YVX5 310 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 GCM2O75603 506 aaPredicted RBP17.97■□□□□ 0.47
USP39-202ENST00000409025 SNAP29O95721 258 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 ALBP02768 609 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 ARAFP10398 606 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 MYF6P23409 242 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 DCTP40126 519 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 HHEXQ03014 270 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 ELOAQ14241 798 aaKnown RBP17.97■□□□□ 0.47
USP39-202ENST00000409025 OR2T5Q6IEZ7 315 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 TMEM26Q6ZUK4 368 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 CCDC80Q76M96 950 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 HIPK1Q86Z02 1210 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 SPEM1Q8N4L4 309 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 OR2T29Q8NH02 315 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 PSMA8Q8TAA3 256 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 TBC1D20Q96BZ9 403 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 TM4SF19Q96DZ7 209 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 BBS4Q96RK4 519 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 RBM4BQ9BQ04 359 aaKnown RBP17.97■□□□□ 0.47
USP39-202ENST00000409025 DOHHQ9BU89 302 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 RBM4Q9BWF3 364 aaKnown RBP17.97■□□□□ 0.47
USP39-202ENST00000409025 ROGDIQ9GZN7 287 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 CHRDQ9H2X0 955 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 ABCG2Q9UNQ0 655 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 ANGPT4Q9Y264 503 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 KLK4Q9Y5K2 254 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 SNX11Q9Y5W9 270 aa17.97■□□□□ 0.47
USP39-202ENST00000409025 URADA6NGE7 173 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 GLOD5A6NK44 160 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 hCG_2039718K7EN88 272 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 SH3BP5O60239 455 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 CTSVO60911 334 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 AIFM1O95831 613 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 WNT1P04628 370 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 ZNF888P0CJ79 500 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms