RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TMEM102Q8N9M5 508 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 SPATA4Q8NEY3 305 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 EEF1AKMT1Q8WVE0 214 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 NRG4Q8WWG1 115 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 SMPDL3AQ92484 453 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 SLCO2A1Q92959 643 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 TSNARE1Q96NA8 513 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 OPALINQ96PE5 141 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 MACROD1Q9BQ69 325 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 ECSITQ9BQ95 431 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 MRPS26Q9BYN8 205 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 TRIM31Q9BZY9 425 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 MRPS30Q9NP92 439 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 ENAMQ9NRM1 1142 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 DDX18Q9NVP1 670 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 GPR83Q9NYM4 423 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 PFDN2Q9UHV9 154 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 IKZF3Q9UKT9 509 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 GRID1Q9ULK0 1009 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 HS3ST3B1Q9Y662 390 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 CSMD2Q7Z408 3487 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 CAPN14A8MX76 684 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 TRIM77I1YAP6 450 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 SOCS6O14544 535 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 TSPAN12O95859 305 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 PRKCAP17252 672 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 TCP1P17987 556 aaKnown RBP9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 CMPK1P30085 196 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 ELK3P41970 407 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 ARSFP54793 590 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 OCA2Q04671 838 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 PRDX1Q06830 199 aaKnown RBP9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 ASPHQ12797 758 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 TTLL9Q3SXZ7 439 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 TCTE1Q5JU00 501 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 ZNF425Q6IV72 752 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 JMJD6Q6NYC1 403 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 PAQR3Q6TCH7 311 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 LAPTM4BQ86VI4 370 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 CNTN4Q8IWV2 1026 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 GALNT16Q8N428 558 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 ARHGEF39Q8N4T4 335 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 AFAP1L2Q8N4X5 818 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 TTC29Q8NA56 475 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 PTERQ96BW5 349 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 ARL5BQ96KC2 179 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 COG8Q96MW5 612 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 GAL3ST1Q99999 423 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 ZFYVE21Q9BQ24 234 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 C17orf62Q9BQA9 187 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 FBXL4Q9UKA2 621 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 RUVBL1Q9Y265 456 aaKnown RBP9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 MRPS2Q9Y399 296 aaKnown RBP9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 CSAG2Q9Y5P2 127 aa9.17□□□□□ -0.94
NIF3L1-202ENST00000409020 VSTM2BA6NLU5 285 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 H7BY64 318 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 KPNA4O00629 521 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 VPS26AO75436 327 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SULT1C4O75897 302 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 PIAS1O75925 651 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 PSMG1O95456 288 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ONECUT2O95948 504 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 IFNA14P01570 189 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 MPC1LP0DKB6 136 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 CXCR2P25025 360 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 RCVRNP35243 200 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 PAFAH1B1P43034 410 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ITGA8P53708 1063 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 STX1BP61266 288 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 TBPL1P62380 186 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 RPP38P78345 283 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 LRRC74AQ0VAA2 488 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SCRN3Q0VDG4 424 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ACAP2Q15057 778 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SYT16Q17RD7 645 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SMU1Q2TAY7 513 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 PRTGQ2VWP7 1150 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 VWA2Q5GFL6 755 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SPANXN3Q5MJ09 141 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 TEDDM1Q5T9Z0 273 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SLC6A19Q695T7 634 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 KIRREL2Q6UWL6 708 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 RAPH1Q70E73 1250 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 PRSS41Q7RTY9 318 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ADCK2Q7Z695 626 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 NKAIN4Q8IVV8 208 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 CDH26Q8IXH8 852 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 CSNK1A1LQ8N752 337 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 CPT1CQ8TCG5 803 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 FKBP10Q96AY3 582 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 C8orf44Q96CB5 159 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 C19orf60Q96EN9 201 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 C11orf24Q96F05 449 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 LINGO1Q96FE5 620 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 CERS2Q96G23 380 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 FAR2Q96K12 515 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 PRAP1Q96NZ9 151 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 OR2A5Q96R48 311 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SMAD5Q99717 465 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms