RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PLXDC1Q8IUK5 500 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 MSRB3Q8IXL7 192 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 CSNK1A1LQ8N752 337 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 TRIML2Q8N7C3 387 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 KCT2Q8NC54 265 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 BHLHE22Q8NFJ8 381 aaPredicted RBP19.91■□□□□ 0.78
TPM1-208ENST00000404484 SLC26A7Q8TE54 656 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 NCSTNQ92542 709 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 MIEF2Q96C03 454 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 LRGUKQ96M69 825 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 PHF12Q96QT6 1004 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 SERINC2Q96SA4 455 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 MAP3K3Q99759 626 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 WASF3Q9UPY6 502 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 CORO2BQ9UQ03 480 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 IGHV1OR21-1A0A087WYE8 117 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 P2RX6O15547 441 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 SRPX2O60687 465 aaPredicted RBP19.91■□□□□ 0.78
TPM1-208ENST00000404484 CPSF4O95639 269 aaKnown RBP19.91■□□□□ 0.78
TPM1-208ENST00000404484 SMIM10L1P0DMW3 83 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 PNLIPP16233 465 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 MSX2P35548 267 aaPredicted RBP19.91■□□□□ 0.78
TPM1-208ENST00000404484 ALDH9A1P49189 494 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 BTN3A2P78410 334 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 MS4A2Q01362 244 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 FOXC1Q12948 553 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 NR0B2Q15466 257 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 FAM92BQ6ZTR7 304 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 OR4A15Q8NGL6 344 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 GOT1L1Q8NHS2 421 aaPredicted RBP19.91■□□□□ 0.78
TPM1-208ENST00000404484 SMIM10Q96HG1 83 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 TGM7Q96PF1 710 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 ZMYND15Q9H091 742 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 TAS2R7Q9NYW3 318 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 ACTR3BQ9P1U1 418 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 PHF11Q9UIL8 331 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 PRDM4Q9UKN5 801 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 SNX13Q9Y5W8 968 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 CEP295Q9C0D2 2601 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 LOC105369274A0A096LPK9 316 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 LOC102723532A0A0G2JNH3 316 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 C4orf51C9J302 202 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 KRT36O76013 467 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 DKK1O94907 266 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 EIF2S1P05198 315 aaKnown RBP19.9■□□□□ 0.78
TPM1-208ENST00000404484 GSNP06396 782 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 CERS1P27544 350 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 CDKN2CP42773 168 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 MAP7Q14244 749 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 RCN1Q15293 331 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 PROX2Q3B8N5 592 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 NDUFAF5Q5TEU4 345 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 ZFP1Q6P2D0 407 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 ZNF621Q6ZSS3 439 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 CLECL1Q8IZS7 167 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 OR4N4Q8N0Y3 316 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 FAM181AQ8N9Y4 354 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 PCDHAC1Q9H158 963 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 TEX10Q9NXF1 929 aaPredicted RBP19.9■□□□□ 0.78
TPM1-208ENST00000404484 ASB4Q9Y574 426 aa19.9■□□□□ 0.78
TPM1-208ENST00000404484 A0A1W2PRB8 838 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 C1orf226A1L170 272 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 PDPK1O15530 556 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 B3GALT2O43825 422 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 PRAMEF10O60809 474 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 ALOX12P18054 663 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 MLLT3P42568 568 aaPredicted RBP19.89■□□□□ 0.77
TPM1-208ENST00000404484 OR1D5P58170 312 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 VSX2P58304 361 aaPredicted RBP19.89■□□□□ 0.77
TPM1-208ENST00000404484 FXNQ16595 210 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 MUM1Q2TAK8 710 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 GTDC1Q4AE62 458 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 LCN8Q6JVE9 175 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 TMEM214Q6NUQ4 689 aaKnown RBP19.89■□□□□ 0.77
TPM1-208ENST00000404484 SPATA24Q86W54 205 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 IFNEQ86WN2 208 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 PROSER1Q86XN7 944 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 MCATQ8IVS2 390 aaKnown RBP19.89■□□□□ 0.77
TPM1-208ENST00000404484 DNAJC22Q8N4W6 341 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 AMER3Q8N944 861 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 HIPK4Q8NE63 616 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 ZCCHC10Q8TBK6 192 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 RSRC1Q96IZ7 334 aaKnown RBP19.89■□□□□ 0.77
TPM1-208ENST00000404484 TRIM8Q9BZR9 551 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 S100A14Q9HCY8 104 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 PDE7BQ9NP56 450 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 STX18Q9P2W9 335 aaKnown RBP19.89■□□□□ 0.77
TPM1-208ENST00000404484 MAGEL2Q9UJ55 1249 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 ANGPTL2Q9UKU9 493 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 PCDHB3Q9Y5E6 796 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 GMEB1Q9Y692 573 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 SLC22A7Q9Y694 548 aa19.89■□□□□ 0.77
TPM1-208ENST00000404484 H0Y3Z8 333 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 CLIC1O00299 241 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 GMNNO75496 209 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 ZBTB11O95625 1053 aaPredicted RBP19.88■□□□□ 0.77
TPM1-208ENST00000404484 B3GALT4O96024 378 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 MYF5P13349 255 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 CKMT2P17540 419 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 SPINK2P20155 84 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms