RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 SIX3O95343 332 aaPredicted RBP12.42□□□□□ -0.42
SDF4-203ENST00000403997 RBP1P09455 135 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 TNNI3P19429 210 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 HIST1H1TP22492 207 aaPredicted RBP12.42□□□□□ -0.42
SDF4-203ENST00000403997 ECHS1P30084 290 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 ARL1P40616 181 aaPredicted RBP12.42□□□□□ -0.42
SDF4-203ENST00000403997 SSR2P43308 183 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 CYB561P49447 251 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 PHEXP78562 749 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 SLAMF1Q13291 335 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 CPSF6Q16630 551 aaKnown RBP eCLIP12.42□□□□□ -0.42
SDF4-203ENST00000403997 TECRLQ5HYJ1 363 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 OR4C11Q6IEV9 310 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 MAMDC2Q7Z304 686 aaPredicted RBP12.42□□□□□ -0.42
SDF4-203ENST00000403997 GOLGA7Q7Z5G4 137 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.42□□□□□ -0.42
SDF4-203ENST00000403997 FJX1Q86VR8 437 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 TMEM132CQ8N3T6 1108 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 RNF175Q8N4F7 328 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 CEP112Q8N8E3 955 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 FAM98AQ8NCA5 519 aaKnown RBP12.42□□□□□ -0.42
SDF4-203ENST00000403997 NCLNQ969V3 563 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 ATP6V1E2Q96A05 226 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 TMEM125Q96AQ2 219 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 RGMAQ96B86 450 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 REPS1Q96D71 796 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 PHF21BQ96EK2 531 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 VMP1Q96GC9 406 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 MTERF1Q99551 399 aaKnown RBP12.42□□□□□ -0.42
SDF4-203ENST00000403997 CENPKQ9BS16 269 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 IPPKQ9H8X2 491 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 CLDN16Q9Y5I7 305 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 MYO9AB2RTY4 2548 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 TEX15Q9BXT5 2789 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 MYO7BQ6PIF6 2116 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 UGDHO60701 494 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 LDB3O75112 727 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 SLC25A12O75746 678 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 WISP2O76076 250 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 ZFAND5O76080 213 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 CLDN1O95832 211 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 CPN2P22792 545 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 PTX3P26022 381 aaPredicted RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 CNTFP26441 200 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 PIK3CBP42338 1070 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 HLCSP50747 726 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 RPS13P62277 151 aaKnown RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 ALDH6A1Q02252 535 aaKnown RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 ID2Q02363 134 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 RBPJQ06330 500 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 SERTAD2Q14140 314 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 ELAVL1Q15717 326 aaKnown RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 C1QL3Q5VWW1 255 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 METTL2BQ6P1Q9 378 aaKnown RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 IFT20Q8IY31 132 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 TMEM156Q8N614 296 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 PTGR2Q8N8N7 351 aaPredicted RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 DCAKDQ8WVC6 231 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 DAZLQ92904 295 aaKnown RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 ISL2Q96A47 359 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 SORBS1Q9BX66 1292 aaKnown RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 NOL11Q9H8H0 719 aaKnown RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 DMRT3Q9NQL9 472 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 VTI1BQ9UEU0 232 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 ZNF180Q9UJW8 692 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 NFU1Q9UMS0 254 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 PPIEQ9UNP9 301 aaKnown RBP12.41□□□□□ -0.42
SDF4-203ENST00000403997 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
SDF4-203ENST00000403997 TRGV8A0A0C4DH27 118 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 TRIM49D1C9J1S8 452 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 NPIPA5E9PKD4 350 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 H0YIV9 168 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 SMIM24O75264 130 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 ITGA10O75578 1167 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 SCELO95171 688 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 MLYCDO95822 493 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 COL6A2P12110 1019 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 COL8A1P27658 744 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 TRHRP34981 398 aaPredicted RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 MAGEA12P43365 314 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 GPR143P51810 404 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 ZRSR2Q15696 482 aaKnown RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 TSNAXIP1Q2TAA8 658 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 GPR180Q86V85 440 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 ARMC10Q8N2F6 343 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 PTPMT1Q8WUK0 201 aaPredicted RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 RELTQ969Z4 430 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 ANKRD9Q96BM1 317 aaPredicted RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 MTFMTQ96DP5 389 aaKnown RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 TRIM44Q96DX7 344 aaPredicted RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 TSPAN10Q9H1Z9 355 aaPredicted RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 TRIM45Q9H8W5 580 aaPredicted RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 LIN28AQ9H9Z2 209 aaKnown RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 MS4A12Q9NXJ0 267 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 ZNF223Q9UK11 482 aaPredicted RBP12.4□□□□□ -0.42
SDF4-203ENST00000403997 TMCO1Q9UM00 188 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 NPIPA1Q9UND3 350 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 YARS2Q9Y2Z4 477 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms