RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 A0A0X1KG70 313 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 ZAR1LA6NP61 321 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 FADS2P1A8MWK0 482 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 MEN1O00255 615 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 HOXD11P31277 338 aaPredicted RBP20.01■□□□□ 0.79
CTCF-202ENST00000401394 CEACAM20Q6UY09 585 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 VPS37AQ8NEZ2 397 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 CDCA4Q9BXL8 241 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 MVB12BQ9H7P6 319 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 CLN6Q9NWW5 311 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 SZT2Q5T011 3432 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 A0A0G2JMP0 313 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 TLR4O00206 839 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 OR10H3O60404 316 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 CSF3P09919 207 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 MSL3P1P0C860 447 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 PAX3P23760 479 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 APEX1P27695 318 aaKnown RBP20.01■□□□□ 0.79
CTCF-202ENST00000401394 SPINT3P49223 89 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 NDUFA5Q16718 116 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 FAM26DQ5JW98 314 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 FAM209AQ5JX71 171 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 ASTLQ6HA08 431 aaPredicted RBP20.01■□□□□ 0.79
CTCF-202ENST00000401394 CHCHD4Q8N4Q1 142 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 CHTF18Q8WVB6 975 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 PIK3R3Q92569 461 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 RNF170Q96K19 258 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 SUV39H2Q9H5I1 410 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 A3GALT2U3KPV4 340 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 BCHEP06276 602 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 IFI30P13284 250 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 HNF4AP41235 474 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 KIR2DL3P43628 341 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 HNMTP50135 292 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 PSPHP78330 225 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 DIRAS2Q96HU8 199 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 LRFN2Q9ULH4 789 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 GPR52Q9Y2T5 361 aa20.01■□□□□ 0.79
CTCF-202ENST00000401394 LSM2Q9Y333 95 aaKnown RBP20.01■□□□□ 0.79
CTCF-202ENST00000401394 HEPACAM2A8MVW5 462 aa20■□□□□ 0.79
CTCF-202ENST00000401394 DVL2O14641 736 aa20■□□□□ 0.79
CTCF-202ENST00000401394 TLX2O43763 284 aaPredicted RBP20■□□□□ 0.79
CTCF-202ENST00000401394 IGSF6O95976 241 aa20■□□□□ 0.79
CTCF-202ENST00000401394 CBSLP0DN79 551 aa20■□□□□ 0.79
CTCF-202ENST00000401394 HLA-FP30511 346 aa20■□□□□ 0.79
CTCF-202ENST00000401394 TIA1P31483 386 aaKnown RBP eCLIP20■□□□□ 0.798e-8■■■■□ 22.8
CTCF-202ENST00000401394 SDC2P34741 201 aa20■□□□□ 0.79
CTCF-202ENST00000401394 CBSP35520 551 aa20■□□□□ 0.79
CTCF-202ENST00000401394 UBE3AQ05086 875 aa20■□□□□ 0.79
CTCF-202ENST00000401394 PIN1Q13526 163 aaPredicted RBP20■□□□□ 0.79
CTCF-202ENST00000401394 IFNL1Q8IU54 200 aa20■□□□□ 0.79
CTCF-202ENST00000401394 RIOK2Q9BVS4 552 aaKnown RBP20■□□□□ 0.79
CTCF-202ENST00000401394 TRPV5Q9NQA5 729 aa20■□□□□ 0.79
CTCF-202ENST00000401394 DYRK4Q9NR20 520 aa20■□□□□ 0.79
CTCF-202ENST00000401394 CFAP97Q9P2B7 532 aa20■□□□□ 0.79
CTCF-202ENST00000401394 PLAGL1Q9UM63 463 aa20■□□□□ 0.79
CTCF-202ENST00000401394 PLXNB3Q9ULL4 1909 aa20■□□□□ 0.79
CTCF-202ENST00000401394 FAM172BPA6NC97 362 aa20■□□□□ 0.79
CTCF-202ENST00000401394 TPD52L2O43399 206 aaKnown RBP20■□□□□ 0.79
CTCF-202ENST00000401394 ETV6P41212 452 aa20■□□□□ 0.79
CTCF-202ENST00000401394 EEF1A2Q05639 463 aaKnown RBP20■□□□□ 0.79
CTCF-202ENST00000401394 MFSD4BQ5TF39 518 aa20■□□□□ 0.79
CTCF-202ENST00000401394 ERAP2Q6P179 960 aa20■□□□□ 0.79
CTCF-202ENST00000401394 PHF6Q8IWS0 365 aaKnown RBP eCLIP20■□□□□ 0.79
CTCF-202ENST00000401394 IL17FQ96PD4 163 aa20■□□□□ 0.79
CTCF-202ENST00000401394 BTNL2Q9UIR0 455 aa20■□□□□ 0.79
CTCF-202ENST00000401394 ITM2BQ9Y287 266 aa20■□□□□ 0.79
CTCF-202ENST00000401394 MAU2Q9Y6X3 613 aa20■□□□□ 0.79
CTCF-202ENST00000401394 SCO2O43819 266 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 PRKYO43930 277 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 TMCC2O75069 709 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 STATHP02808 62 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 CKMP06732 381 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 GPC1P35052 558 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 LIMS1P48059 325 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 ZNF770Q6IQ21 691 aaPredicted RBP19.99■□□□□ 0.79
CTCF-202ENST00000401394 SYCE2Q6PIF2 218 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 SZRD1Q7Z422 152 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 GPR32P1Q8NGA4 272 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 RRAGCQ9HB90 399 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 SLAMF7Q9NQ25 335 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 REV1Q9UBZ9 1251 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 OR6C70A6NIJ9 312 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 PRRG1O14668 218 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 PLA2G10O15496 165 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 SCG5P05408 212 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 CD72P21854 359 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 ETV5P41161 510 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 TUFMP49411 452 aaKnown RBP19.99■□□□□ 0.79
CTCF-202ENST00000401394 ETV1P50549 477 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 OLR1P78380 273 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 ZNF91Q05481 1191 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 IRF5Q13568 498 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 LARS2Q15031 903 aaKnown RBP19.99■□□□□ 0.79
CTCF-202ENST00000401394 P2RY14Q15391 338 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.99■□□□□ 0.792e-7■■□□□ 14.3
CTCF-202ENST00000401394 LIPJQ5W064 366 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 MSANTD1Q6ZTZ1 278 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 FAM9CQ8IZT9 166 aa19.99■□□□□ 0.79
CTCF-202ENST00000401394 ST13P5Q8NFI4 369 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms