RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 VPS33AQ96AX1 596 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 SLC7A6OSQ96CW6 309 aaPredicted RBP16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 RCN3Q96D15 328 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 MTERF3Q96E29 417 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 DCBLD2Q96PD2 775 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 MAPKAP1Q9BPZ7 522 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 ANKHQ9HCJ1 492 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 LYARQ9NX58 379 aaKnown RBP16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 KCMF1Q9P0J7 381 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 SERTAD3Q9UJW9 196 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 CACNA1GO43497 2377 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 A0A1W2PP18 115 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 ZNF860A6NHJ4 632 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 CCDC154A6NI56 674 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 GABRR3A8MPY1 467 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 BBIP1A8MTZ0 92 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 DNAJB6O75190 326 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 PGRP06401 933 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 PIM1P11309 404 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 COX7A2P14406 83 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 NCALDP61601 193 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 PHC1P78364 1004 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 TLR1Q15399 786 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 MUM1Q2TAK8 710 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 REP15Q6BDI9 236 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 RETREG3Q86VR2 466 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 GPR135Q8IZ08 494 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 BMPERQ8N8U9 685 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 OR9A4Q8NGU2 314 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 FBXO27Q8NI29 283 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 COQ8BQ96D53 544 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 OR6C1Q96RD1 312 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 NPLQ9BXD5 320 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 LYRM4Q9HD34 91 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 ASCL3Q9NQ33 180 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 OCIAD1Q9NX40 245 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 FBXW2Q9UKT8 454 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 DAPP1Q9UN19 280 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 ATG4BQ9Y4P1 393 aa16.01■□□□□ 0.15
TSPAN4-205ENST00000397406 A0A0A6YYC8 382 aaPredicted RBP16■□□□□ 0.15
TSPAN4-205ENST00000397406 A0A1W2PR48 441 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 I3L1I5 382 aaPredicted RBP16■□□□□ 0.15
TSPAN4-205ENST00000397406 SGK494L7N484 410 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 CFLARO15519 480 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 PROM1O43490 865 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 TBX19O60806 448 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 HNRNPCL1O60812 293 aaKnown RBP16■□□□□ 0.15
TSPAN4-205ENST00000397406 GUCY1B2O75343 617 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 NSA2O95478 260 aaKnown RBP16■□□□□ 0.15
TSPAN4-205ENST00000397406 DDCP20711 480 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 CSTF2P33240 577 aaKnown RBP eCLIP16■□□□□ 0.15
TSPAN4-205ENST00000397406 S100A3P33764 101 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 RPL3P39023 403 aaKnown RBP16■□□□□ 0.15
TSPAN4-205ENST00000397406 LIM2P55344 173 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 OLR1P78380 273 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 SRSF11Q05519 484 aaKnown RBP16■□□□□ 0.15
TSPAN4-205ENST00000397406 HEPACAMQ14CZ8 416 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 PRSS53Q2L4Q9 553 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 FAM214AQ32MH5 1076 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 TBC1D25Q3MII6 688 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 SOWAHCQ53LP3 525 aaPredicted RBP16■□□□□ 0.15
TSPAN4-205ENST00000397406 ZNF385BQ569K4 471 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 COQ5Q5HYK3 327 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 NDUFAF5Q5TEU4 345 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 PRAMEF17Q5VTA0 474 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 ANKRD26P1Q6NSI1 321 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 NIPAL1Q6NVV3 410 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 RINLQ6ZS11 566 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 R3HCC1LQ7Z5L2 792 aaKnown RBP16■□□□□ 0.15
TSPAN4-205ENST00000397406 GPR180Q86V85 440 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 AGBL5Q8NDL9 886 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 OR8J2Q8NGG1 315 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 OR5T3Q8NGG3 340 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 UCN3Q969E3 161 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 ZNF764Q96H86 408 aaPredicted RBP16■□□□□ 0.15
TSPAN4-205ENST00000397406 DEPDC7Q96QD5 511 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 NPAS2Q99743 824 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 CUTCQ9NTM9 273 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 NDUFAF1Q9Y375 327 aa16■□□□□ 0.15
TSPAN4-205ENST00000397406 EFCAB7A8K855 629 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 B2RBV5 119 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 AGRPO00253 132 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 MRASO14807 208 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 ANGPT2O15123 496 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 ZNF749O43361 778 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 RDH16O75452 317 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 PRKRAO75569 313 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 AIFM1O95831 613 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 LAMP1P11279 417 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 DRD2P14416 443 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 KIR3DL1P43629 444 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 MNAT1P51948 309 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 WNT3P56703 355 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 TNFRSF17Q02223 184 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 FOXM1Q08050 763 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 PGS1Q32NB8 556 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 PAGE3Q5JUK9 113 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 CPTPQ5TA50 214 aa15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 YOD1Q5VVQ6 348 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-205ENST00000397406 C18orf63Q68DL7 685 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms