RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 COPS7BQ9H9Q2 264 aaPredicted RBP13.68□□□□□ -0.22
SEC13-208ENST00000397109 PRDM9Q9NQV7 894 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 LUZP4Q9P127 313 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 MMACHCQ9Y4U1 282 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 USH1CQ9Y6N9 552 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 ESPL1Q14674 2120 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 SHANK1Q9Y566 2161 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 IGHV3-20A0A0C4DH32 117 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 SYNDIG1LA6NDD5 238 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 C4orf51C9J302 202 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 CLDN4O14493 209 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 UGDHO60701 494 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 SMIM24O75264 130 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 TBX6O95947 436 aaPredicted RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 MTTPP55157 894 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 ABHD17BQ5VST6 288 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 B3GNTL1Q67FW5 361 aaPredicted RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 PAPD4Q6PIY7 484 aaKnown RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 CHSY3Q70JA7 882 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 TRPM8Q7Z2W7 1104 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 CUZD1Q86UP6 607 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 SIRT6Q8N6T7 355 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 OR7G3Q8NG95 312 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 HAS2Q92819 552 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 TSLPQ969D9 159 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 KCNC2Q96PR1 638 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 TBCDQ9BTW9 1192 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 MS4A8Q9BY19 250 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 MAP10Q9P2G4 905 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 MRPS33Q9Y291 106 aaKnown RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 RRP15Q9Y3B9 282 aaKnown RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 TSC22D4Q9Y3Q8 395 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 PCDHGA11Q9Y5H2 935 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 UBR5O95071 2799 aaPredicted RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 A0A0G2JN53 185 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 STX16-NPEPL1H3BU86 382 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 STX16O14662 325 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 DCTN3O75935 186 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 SNUPNO95149 360 aaKnown RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 CELA2AP08217 269 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 PCNAP12004 261 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 PIK3CBP42338 1070 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 TSFMP43897 325 aaKnown RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 RAB38P57729 211 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 ARG2P78540 354 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 PHEXP78562 749 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 GTF2H2Q13888 395 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 RUNX2Q13950 521 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 ZNF169Q14929 603 aaPredicted RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 H3F3CQ6NXT2 135 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 GTF2H2CQ6P1K8 395 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 CCDC63Q8NA47 563 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 REPS1Q96D71 796 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 SNRNP40Q96DI7 357 aaKnown RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 CMTM7Q96FZ5 175 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 CNDP1Q96KN2 507 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 ZNF354BQ96LW1 612 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 F2RL3Q96RI0 385 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 CENPKQ9BS16 269 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 RNF32Q9H0A6 362 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 IPPKQ9H8X2 491 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 ACTR8Q9H981 624 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 KCNK13Q9HB14 408 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 MMP25Q9NPA2 562 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 THAP1Q9NVV9 213 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 PCDHGA10Q9Y5H3 936 aa13.67□□□□□ -0.22
SEC13-208ENST00000397109 COPG1Q9Y678 874 aaKnown RBP13.67□□□□□ -0.22
SEC13-208ENST00000397109 IGKV3D-11A0A0A0MRZ8 115 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 TCRBV16S1A1N1A0A5B0 115 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 FAM227AF5H4B4 570 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 G3V2L1 256 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 HSD17B7P56937 341 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 TAS2R50P59544 299 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 BTG2P78543 158 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 ADNP2Q6IQ32 1131 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 CGB2Q6NT52 195 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 ZYG11AQ6WRX3 759 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 FAM47EQ6ZV65 393 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 GOLGA7Q7Z5G4 137 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 MYLK4Q86YV6 388 aaPredicted RBP13.66□□□□□ -0.22
SEC13-208ENST00000397109 ZNF595Q8IYB9 648 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 CISD2Q8N5K1 135 aaKnown RBP13.66□□□□□ -0.22
SEC13-208ENST00000397109 PTGR2Q8N8N7 351 aaPredicted RBP13.66□□□□□ -0.22
SEC13-208ENST00000397109 PHF21BQ96EK2 531 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 C1QTNF3Q9BXJ4 246 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 LYRM4Q9HD34 91 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 PRDM7Q9NQW5 492 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 STMN3Q9NZ72 180 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 ABI3Q9P2A4 366 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 DAPP1Q9UN19 280 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 CSAG2Q9Y5P2 127 aa13.66□□□□□ -0.22
SEC13-208ENST00000397109 TRAV17A0A0B4J275 112 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 LRRC14BA6NHZ5 514 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 A8MT66 165 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 A8MUI8 341 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 H0YIV9 168 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 E2F3O00716 465 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 CDK2AP1O14519 115 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 SNNO75324 88 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms