RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SH2B3Q9UQQ2 575 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 KLHL20Q9Y2M5 609 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 MRPS2Q9Y399 296 aaKnown RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 RNF11Q9Y3C5 154 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 GMNCA6NCL1 334 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 UBFD1O14562 309 aaKnown RBP12.88□□□□□ -0.35
SEC13-205ENST00000397101 FFAR3O14843 346 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 AZIN1O14977 448 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 GPR42O15529 346 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 RASAL1O95294 804 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 FKBP9O95302 570 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 BMP10O95393 424 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 ENO1P06733 434 aaKnown RBP12.88□□□□□ -0.35
SEC13-205ENST00000397101 PRR35P0CG20 571 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 TROVE2P10155 538 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEC13-205ENST00000397101 ACPPP15309 386 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 MAGP20916 626 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 HRH2P25021 359 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 HNF4AP41235 474 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 AP2B1P63010 937 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 ADORA2A-AS1P86434 159 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 OCRLQ01968 901 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 SF3A3Q12874 501 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEC13-205ENST00000397101 IFT88Q13099 833 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 SLBPQ14493 270 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEC13-205ENST00000397101 SGO1Q5FBB7 561 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 CLEC6AQ6EIG7 209 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 PRMT9Q6P2P2 845 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 FIGLAQ6QHK4 219 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 SLCO4C1Q6ZQN7 724 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 RIPOR1Q6ZS17 1223 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 NDUFAF7Q7L592 441 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 CDH24Q86UP0 819 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 WDR75Q8IWA0 830 aaKnown RBP12.88□□□□□ -0.35
SEC13-205ENST00000397101 CLYBLQ8N0X4 340 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 TTC29Q8NA56 475 aaPredicted RBP12.88□□□□□ -0.35
SEC13-205ENST00000397101 MTFMTQ96DP5 389 aaKnown RBP12.88□□□□□ -0.35
SEC13-205ENST00000397101 THOC1Q96FV9 657 aaKnown RBP12.88□□□□□ -0.35
SEC13-205ENST00000397101 C7orf26Q96N11 449 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 CRB3Q9BUF7 120 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 EFCAB11Q9BUY7 163 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 RABEP2Q9H5N1 569 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 TMEM184CQ9NVA4 438 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 FGFR1OP2Q9NVK5 253 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 CTSFQ9UBX1 484 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 TRPS1Q9UHF7 1281 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 SNX6Q9UNH7 406 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 TRAF6Q9Y4K3 522 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 TIMM22Q9Y584 194 aa12.88□□□□□ -0.35
SEC13-205ENST00000397101 NCOA6Q14686 2063 aaPredicted RBP12.87□□□□□ -0.35
SEC13-205ENST00000397101 IGLV3-12A0A075B6K2 115 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 SRPX2O60687 465 aaPredicted RBP12.87□□□□□ -0.35
SEC13-205ENST00000397101 UGDHO60701 494 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 EDF1O60869 148 aaKnown RBP12.87□□□□□ -0.35
SEC13-205ENST00000397101 CLDN14O95500 239 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 KRT6AP02538 564 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 KRT6BP04259 564 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 SERPINA7P05543 415 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 UROSP10746 265 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 CD1EP15812 388 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 EPORP19235 508 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 MST1P26927 711 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 SERPINB3P29508 390 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 ARRB2P32121 409 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 KRT6CP48668 564 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 SEC24CP53992 1094 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 YBX1P67809 324 aaKnown RBP12.87□□□□□ -0.35
SEC13-205ENST00000397101 PHEXP78562 749 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 CBX1P83916 185 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 TRAF3Q13114 568 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 DDX39BQ13838 428 aaKnown RBP12.87□□□□□ -0.35
SEC13-205ENST00000397101 GRHL2Q6ISB3 625 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 LETMD1Q6P1Q0 360 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 MED27Q6P2C8 311 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 DDIASQ8IXT1 998 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 PIWIL2Q8TC59 973 aaKnown RBP12.87□□□□□ -0.35
SEC13-205ENST00000397101 STT3BQ8TCJ2 826 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 BRIX1Q8TDN6 353 aaKnown RBP12.87□□□□□ -0.35
SEC13-205ENST00000397101 UBE2E3Q969T4 207 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 REPS1Q96D71 796 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 FAR2Q96K12 515 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 KCNA7Q96RP8 456 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 SORT1Q99523 831 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 PLCD4Q9BRC7 762 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 ELOVL6Q9H5J4 265 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 MCCC2Q9HCC0 563 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 ZNF160Q9HCG1 818 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 PFDN4Q9NQP4 134 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 PCDHGB6Q9Y5F9 930 aa12.87□□□□□ -0.35
SEC13-205ENST00000397101 NSG1A0A0A6YYJ2 146 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 A0A1B0GTL3 188 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 FEZF1A0PJY2 475 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 ANKDD1BA6NHY2 528 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 TMEM233B4DJY2 109 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 SLCO1B7G3V0H7 640 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 OR1F1O43749 312 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 SLC19A2O60779 497 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 SKAP2O75563 359 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms