RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CADM4Q8NFZ8 388 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 OR52N2Q8NGI0 321 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 HMGCLL1Q8TB92 370 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 PTERQ96BW5 349 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 SGPP1Q9BX95 441 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 ZDHHC5Q9C0B5 715 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM38AQ9H6F2 299 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 PDP1Q9P0J1 537 aaPredicted RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 NDOR1Q9UHB4 597 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 GMEB2Q9UKD1 530 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 RNF11Q9Y3C5 154 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM14AQ9Y6G1 99 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 PIGBOS1A0A0B4J2F0 54 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 ARHGEF33A8MVX0 844 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 M0QX08 132 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 TIPRLO75663 272 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 HLA-EP13747 358 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 DCKP27707 260 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 INAQ16352 499 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 HKDC1Q2TB90 917 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 UGT3A2Q3SY77 523 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 IQCCQ4KMZ1 466 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 SCIMPQ6UWF3 145 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 C5orf46Q6UWT4 87 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 SLITRK4Q8IW52 837 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 GALNT12Q8IXK2 581 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 LMNTD1Q8N9Z9 388 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 GTF2H4Q92759 462 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 EFHD2Q96C19 240 aaPredicted RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 BTBD2Q9BX70 525 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 TBL1XR1Q9BZK7 514 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 CXCL16Q9H2A7 254 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 DCAF13Q9NV06 445 aaKnown RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 PTGFRNQ9P2B2 879 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 LRRK1Q38SD2 2015 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 TTLL8A6PVC2 850 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 GTPBP1O00178 669 aaKnown RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 EMC8O43402 210 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 GPR37L1O60883 481 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 JRKO75564 520 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 THEGLP0DJG4 465 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 NCBP2P52298 156 aaKnown RBP eCLIP3.24□□□□□ -1.892e-6■□□□□ 9.3
VPS13C-203ENST00000395896 PRRT3Q5FWE3 981 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 CD300LGQ6UXG3 332 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 LAS2Q8IYD9 372 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 ANKFN1Q8N957 763 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 HDAC2Q92769 488 aaKnown RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 MCMBPQ9BTE3 642 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 MRI1Q9BV20 369 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 PTGES2Q9H7Z7 377 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 SIRT5Q9NXA8 310 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 TAS2R7Q9NYW3 318 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 RIIAD1A6NNX1 92 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 CENPBD1B2RD01 187 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 CBFA2T3O75081 653 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 VNN2O95498 520 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 IMPA1P29218 277 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 GRK6P43250 576 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 BDKRB1P46663 353 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 HK3P52790 923 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 SLC16A1P53985 500 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 MTPNP58546 118 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 ACTC1P68032 377 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 ACTA1P68133 377 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 CD47Q08722 323 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 CRB2Q5IJ48 1285 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 TUBA3EQ6PEY2 450 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 CXXC5Q7LFL8 322 aaKnown RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 NRROSQ86YC3 692 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 OR8K5Q8NH50 307 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 CEP76Q8TAP6 659 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 SLC9A6Q92581 669 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 EXOSC8Q96B26 276 aaKnown RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 ZHX1-C8orf76Q96EF9 292 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 LPAR4Q99677 370 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 KAT8Q9H7Z6 458 aaKnown RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 I6L893 689 aaPredicted RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 MUSKO15146 869 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 ALOX5P09917 674 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 LINGO3P0C6S8 592 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 IMPDH2P12268 514 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 MAT2AP31153 395 aaKnown RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 IL12RB1P42701 662 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 LASP1Q14847 261 aaKnown RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 TRAM2Q15035 370 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF595Q8IYB9 648 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 PGBD5Q8N414 524 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 RASGEF1AQ8N9B8 481 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 GPR151Q8TDV0 419 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 CPNE2Q96FN4 548 aaPredicted RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 TCTN2Q96GX1 697 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 MS4A4EQ96PG1 132 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 APOOQ9BUR5 198 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 YIPF3Q9GZM5 350 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 KIR3DX1Q9H7L2 352 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 EXOSC4Q9NPD3 245 aaKnown RBP3.24□□□□□ -1.89
VPS13C-203ENST00000395896 SARDHQ9UL12 918 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 XKRYO14609 159 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 ALPPP05187 535 aa3.24□□□□□ -1.89
VPS13C-203ENST00000395896 KLK1P06870 262 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms