RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ZNF551Q7Z340 670 aaPredicted RBP8.19□□□□□ -1.1
TDP1-203ENST00000393454 SERPINA11Q86U17 422 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 ADGRG5Q8IZF4 528 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 LILRA2Q8N149 483 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 ARL10Q8N8L6 244 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 TMEM105Q8N8V8 129 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 DTWD2Q8NBA8 298 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 FBXO30Q8TB52 745 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 FAM110BQ8TC76 370 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 LRTOMTQ8WZ04 291 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 OR5P2Q8WZ92 322 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 ZBED6CLQ96FA7 236 aaPredicted RBP8.19□□□□□ -1.1
TDP1-203ENST00000393454 DUS3LQ96G46 650 aaKnown RBP8.19□□□□□ -1.1
TDP1-203ENST00000393454 SERINC2Q96SA4 455 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 KLHL4Q9C0H6 718 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 SEMA6AQ9H2E6 1030 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 FAM60AQ9NP50 221 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 IRAK4Q9NWZ3 460 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 ACSL6Q9UKU0 697 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 PADI4Q9UM07 663 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 C15orf41Q9Y2V0 281 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 MAP4K5Q9Y4K4 846 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 NCOR1O75376 2440 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 CABIN1Q9Y6J0 2220 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 ZNF860A6NHJ4 632 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 PGRMC2O15173 223 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 ZSCAN9O15535 394 aaPredicted RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 HNRNPRO43390 633 aaKnown RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 PROM1O43490 865 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 CREG1O75629 220 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 KCNK5O95279 499 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 KRT75O95678 551 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 ALOX12P18054 663 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 UQCRC2P22695 453 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 CPN2P22792 545 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 NTSP30990 170 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 GPC1P35052 558 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 GFERP55789 205 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 RGNQ15493 299 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 TAF11Q15544 211 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 MTX3Q5HYI7 312 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 ZC3H12BQ5HYM0 836 aaKnown RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 CPZQ66K79 652 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 ERICH5Q6P6B1 374 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 IZUMO2Q6UXV1 221 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 AMIGO2Q86SJ2 522 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 GATAD2AQ86YP4 633 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 MCATQ8IVS2 390 aaKnown RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 SLC35F3Q8IY50 421 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 GOLM1Q8NBJ4 401 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 NETO1Q8TDF5 533 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 DNAJC9Q8WXX5 260 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 ZDHHC12Q96GR4 267 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 TCTN2Q96GX1 697 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 RNF145Q96MT1 663 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 DPH2Q9BQC3 489 aaPredicted RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 CXorf36Q9H7Y0 433 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 GORASP2Q9H8Y8 452 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 SLAMF7Q9NQ25 335 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 SLC35C2Q9NQQ7 365 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 C1GALT1Q9NS00 363 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 GIMAP4Q9NUV9 329 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 ARMC1Q9NVT9 282 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 SOHLH2Q9NX45 425 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 RAPGEFL1Q9UHV5 662 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 RIMS3Q9UJD0 308 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 ENTPD4Q9Y227 616 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 MRPS2Q9Y399 296 aaKnown RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 RNF103-CHMP3A0A140T963 221 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 HCRTR1O43613 425 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 NUDT7P0C024 238 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 C8orf89P0DMQ9 161 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 ETFAP13804 333 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 BUD31P41223 144 aaPredicted RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 MLLT3P42568 568 aaPredicted RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 RXRGP48443 463 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 PRIM2P49643 509 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 NCBP2P52298 156 aaKnown RBP eCLIP8.18□□□□□ -1.11e-7■■■■□ 26
TDP1-203ENST00000393454 EPHA4P54764 986 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 PCBP4P57723 403 aaKnown RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 SNRPNP63162 240 aaKnown RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 OLR1P78380 273 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 CHRNB3Q05901 458 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 SPIDRQ14159 915 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 SIM2Q14190 667 aaPredicted RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 SHBQ15464 509 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 VMACQ2NL98 169 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 HLA-BQ31612 363 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 FAM98BQ52LJ0 330 aaKnown RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 COX20Q5RI15 118 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 SZRD1Q7Z422 152 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 RNF130Q86XS8 419 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 ZZZ3Q8IYH5 903 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 N4BP2L2Q92802 583 aaPredicted RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 TMEM121BQ9BXQ6 578 aaPredicted RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 RAD21L1Q9H4I0 556 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 TAS2R7Q9NYW3 318 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 EHD3Q9NZN3 535 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 PHF11Q9UIL8 331 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 PSME2Q9UL46 239 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms