RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 RAB8AP61006 207 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 IL18R1Q13478 541 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 PDGFRLQ15198 375 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 RGNQ15493 299 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 GRHL2Q6ISB3 625 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 CEP68Q76N32 757 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 LUZP2Q86TE4 346 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 ZZZ3Q8IYH5 903 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 DUS3LQ96G46 650 aaKnown RBP10.09□□□□□ -0.79
CALD1-203ENST00000393118 TOX2Q96NM4 488 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 PHOX2BQ99453 314 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 TMEM45AQ9NWC5 275 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 OR1A2Q9Y585 309 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 IGLON5A6NGN9 336 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 PTNP21246 168 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 BMPR1AP36894 532 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 CCR8P51685 355 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 NCS1P62166 190 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 TARDBPQ13148 414 aaKnown RBP eCLIP10.09□□□□□ -0.79
CALD1-203ENST00000393118 NKG7Q16617 165 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 EXOC3L2Q2M3D2 409 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 SHQ1Q6PI26 577 aaKnown RBP10.09□□□□□ -0.79
CALD1-203ENST00000393118 C19orf18Q8NEA5 215 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 ADAMTS19Q8TE59 1207 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 ASB12Q8WXK4 309 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 MED30Q96HR3 178 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 ZSWIM3Q96MP5 696 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
CALD1-203ENST00000393118 MAGIXQ9H6Y5 334 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 IL1RAPQ9NPH3 570 aa10.09□□□□□ -0.79
CALD1-203ENST00000393118 DICER1Q9UPY3 1922 aaKnown RBP10.09□□□□□ -0.79
CALD1-203ENST00000393118 GSAPA4D1B5 854 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 ERI3O43414 337 aaKnown RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 CXCL10P02778 98 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 MYL12AP19105 171 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 GSTM5P46439 218 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 RPS3AP61247 264 aaKnown RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 GPM6BQ13491 265 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 CAMK2BQ13554 666 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 ELAVL3Q14576 367 aaKnown RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 SPCS2Q15005 226 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 NCF4Q15080 339 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 QPRTQ15274 297 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 ZNF517Q6ZMY9 492 aaPredicted RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 ERN2Q76MJ5 926 aaKnown RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 BTLAQ7Z6A9 289 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 GALNT13Q8IUC8 556 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 CPA6Q8N4T0 437 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 SLC5A8Q8N695 610 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 UBE2FQ969M7 185 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 KCNS3Q9BQ31 491 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 TVP23BQ9NYZ1 205 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 SESN1Q9Y6P5 492 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 RALGAPA2Q2PPJ7 1873 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 GAPDHSO14556 408 aaPredicted RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 PDE9AO76083 593 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 TPPPO94811 219 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 LCKP06239 509 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 PSKH1P11801 424 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 IDSP22304 550 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 MXD1Q05195 221 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 LRRC26Q2I0M4 334 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 KLHL12Q53G59 568 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 CDKL4Q5MAI5 379 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 AGAP7PQ5VUJ5 663 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 CPZQ66K79 652 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 SPATC1Q76KD6 591 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 OR9Q2Q8NGE9 314 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 ZCCHC10Q8TBK6 192 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 GEMIN6Q8WXD5 167 aaKnown RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 SLC9A6Q92581 669 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 TESCQ96BS2 214 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 ARMC5Q96C12 935 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 CXorf40BQ96DE9 158 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 ZBED6CLQ96FA7 236 aaPredicted RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 MROQ9BYG7 248 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 DCSTAMPQ9H295 470 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 CARS2Q9HA77 564 aaKnown RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 TRBV5-4A0A0C4DH59 114 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 H0YC42 278 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 K7ESM1 405 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 SLC22A1O15245 554 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 NME6O75414 186 aaPredicted RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 DNTTP04053 509 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 APODP05090 189 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 ADRB3P13945 408 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 GSTM2P28161 218 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 NCBP2P52298 156 aaKnown RBP eCLIP10.08□□□□□ -0.8
CALD1-203ENST00000393118 HBA1P69905 142 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 NKX3-2P78367 333 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 TGM3Q08188 693 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 FXNQ16595 210 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 METTL2BQ6P1Q9 378 aaKnown RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 NXPE4Q6UWF7 544 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 HDDC2Q7Z4H3 204 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 BPHLQ86WA6 291 aaPredicted RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 NUDT13Q86X67 352 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 DCUN1D3Q8IWE4 304 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 UBTD2Q8WUN7 234 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 ZNF689Q96CS4 500 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms