RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 VEGFDO43915 354 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PCDH8O95206 1070 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 C6orf47O95873 294 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 GBAP04062 536 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 NUDT7P0C024 238 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ITGA2P17301 1181 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 KELP23276 732 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 IFI44LQ53G44 452 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PRAMEF14Q5SWL7 426 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PRAMEF13Q5VWM6 474 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 TSPYL5Q86VY4 417 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 CHPFQ8IZ52 775 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 TBC1D15Q8TC07 691 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 CHPT1Q8WUD6 406 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 MAL2Q969L2 176 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ZNF347Q96SE7 839 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 EPYCQ99645 322 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 BARD1Q99728 777 aaKnown RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 TM9SF2Q99805 663 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 MCCC2Q9HCC0 563 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PLXNA2O75051 1894 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 M0R3G1 203 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PLK4O00444 970 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 SULT1C4O75897 302 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 C1QCP02747 245 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 RPN2P04844 631 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ADRB3P13945 408 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 SELLP14151 372 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PTX3P26022 381 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PSMB9P28065 219 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 RRM2P31350 389 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PBX2P40425 430 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ST13P50502 369 aaKnown RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 TAS2R50P59544 299 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ELAVL3Q14576 367 aaKnown RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PDGFRLQ15198 375 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ATAT1Q5SQI0 421 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 C12orf40Q86WS4 652 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 LAS2Q8IYD9 372 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 OXR1Q8N573 874 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 TP53I13Q8NBR0 393 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 OR52N2Q8NGI0 321 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 C16orf78Q8WTQ4 265 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 C11orf24Q96F05 449 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 CCDC120Q96HB5 630 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 BTBD2Q9BX70 525 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 SGPP1Q9BX95 441 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 NKX2-4Q9H2Z4 354 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 DPEP2Q9H4A9 486 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ZNF556Q9HAH1 456 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ERVK-18Q9QC07 812 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ENOPH1Q9UHY7 261 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 TESMINQ9Y4I5 508 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 C1orf226A1L170 272 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ANKDD1BA6NHY2 528 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 B8ZZF3 427 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 GPR37L1O60883 481 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 CLPXO76031 633 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 INMTO95050 263 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ALX3O95076 343 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 KLK1P06870 262 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ETFAP13804 333 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ZNF8P17098 575 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 PIK3CBP42338 1070 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ERVK-21P61565 698 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 CSNK2BP67870 215 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 MEF2AQ02078 507 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 TAP2Q03519 686 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 NPRL3Q12980 569 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 FADDQ13158 208 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ITGADQ13349 1161 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 GAB1Q13480 694 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 SCARB2Q14108 478 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 EIF4HQ15056 248 aaKnown RBP9.22□□□□□ -0.93
COL6A3-204ENST00000392003 GTF2IRD2BQ6EKJ0 949 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 SDE2Q6IQ49 451 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 TMIGD1Q6UXZ0 262 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 GTF2IRD2Q86UP8 949 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 C17orf64Q86WR6 236 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 DNAJC5GQ8N7S2 189 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 RSPRY1Q96DX4 576 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 MTERF3Q96E29 417 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 WDR34Q96EX3 536 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 MYNNQ9NPC7 610 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 RASSF1Q9NS23 344 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 REV1Q9UBZ9 1251 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 GPR34Q9UPC5 381 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 ANGPT4Q9Y264 503 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 F5P12259 2224 aa9.22□□□□□ -0.93
COL6A3-204ENST00000392003 A0A1W2PRB8 838 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 PRRT4C9JH25 899 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 ZNF12P17014 697 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 CASP9P55211 416 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 SELENOWP63302 87 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 HBA1P69905 142 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 RPP38P78345 283 aaKnown RBP9.21□□□□□ -0.93
COL6A3-204ENST00000392003 FCHO2Q0JRZ9 810 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 NFE2L1Q14494 772 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 SPCS2Q15005 226 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 FAM122CQ6P4D5 195 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms