RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ICOSLGO75144 302 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 IGHV3-23P01764 117 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 HPNP05981 417 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 RNASE2P10153 161 aaKnown RBP0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 MAGP20916 626 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 ID1P41134 155 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 MATR3P43243 847 aaKnown RBP eCLIP0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 SNAPC1Q16533 368 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 RBBP7Q16576 425 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 WSCD2Q2TBF2 565 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 RFTN2Q52LD8 501 aaPredicted RBP0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 LACTB2Q53H82 288 aaPredicted RBP0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 TCEAL6Q6IPX3 200 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 PRSS35Q8N3Z0 413 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 TTC39CQ8N584 583 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 ANKRD13CQ8N6S4 541 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 CLEC1AQ8NC01 280 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 SMPDL3AQ92484 453 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 MARC2Q969Z3 335 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 PYCR2Q96C36 320 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 CDHR1Q96JP9 859 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 GUCD1Q96NT3 240 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 IARS2Q9NSE4 1012 aaKnown RBP0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 LUZP4Q9P127 313 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 ORC3Q9UBD5 711 aaPredicted RBP0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 MLXQ9UH92 298 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 SLC24A2Q9UI40 661 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF835Q9Y2P0 537 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 COMMD10Q9Y6G5 202 aa0.4□□□□□ -2.35
RNU6-239P-201ENST00000390990 TRBV6-6A0A0A6YYG2 114 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF233A6NK53 670 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 E5RGE8 158 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 IPO8O15397 1037 aaKnown RBP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 AP5Z1O43299 807 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 UFL1O94874 794 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 FGF19O95750 216 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 STAG3L1P0CL83 205 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 FOSL2P15408 326 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 AZGP1P25311 298 aaKnown RBP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 OR3A4PP47883 348 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 UBASH3AP57075 661 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 GSTO1P78417 241 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 SETQ01105 290 aaPredicted RBP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 CNTN1Q12860 1018 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 DAZ2Q13117 558 aaKnown RBP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 TNK1Q13470 666 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 MICAQ29983 383 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 LETM2Q2VYF4 491 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 ANKRD55Q3KP44 614 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 KRTAP13-2Q52LG2 175 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 SBK1Q52WX2 424 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF542PQ5EBM4 170 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 PAGE2BQ5JRK9 111 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF770Q6IQ21 691 aaPredicted RBP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 C15orf52Q6ZUT6 534 aaKnown RBP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 DET1Q7L5Y6 550 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 SAXO1Q8IYX7 474 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 ARL14Q8N4G2 192 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF615Q8N8J6 731 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 DCAF4L2Q8NA75 395 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF622Q969S3 477 aaKnown RBP eCLIP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 SNRNP40Q96DI7 357 aaKnown RBP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 SLC25A38Q96DW6 304 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 OTUB1Q96FW1 271 aaPredicted RBP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 MUS81Q96NY9 551 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 C19orf24Q9BVV8 132 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 SLC17A9Q9BYT1 436 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 TIGARQ9NQ88 270 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 MIEF1Q9NQG6 463 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 DAZ3Q9NR90 486 aaKnown RBP0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF229Q9UJW7 825 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 AGTPBP1Q9UPW5 1226 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 NSG2Q9Y328 171 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 SH3GLB1Q9Y371 365 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 CACNG2Q9Y698 323 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 TENM3Q9P273 2699 aa0.39□□□□□ -2.35
RNU6-239P-201ENST00000390990 LOC100509620A0A075B734 347 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 IGHV3OR16-12A0A075B7B8 117 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 PTGES3LE9PB15 166 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 PDGFBP01127 241 aaPredicted RBP0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 CALCAP01258 141 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 ATP5BP06576 529 aaKnown RBP0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 FCGR3AP08637 254 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 HSD17B1P14061 328 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZP3P21754 424 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 PPP2R1AP30153 589 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 PPP2R1BP30154 601 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 NRIP1P48552 1158 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 MAPK11Q15759 364 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF528Q3MIS6 628 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 CHRFAM7AQ494W8 412 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 HAUS3Q68CZ6 603 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 FUT10Q6P4F1 479 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 GPR65Q8IYL9 337 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 RNF149Q8NC42 400 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF596Q8TC21 504 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 ARNTL2Q8WYA1 636 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 SLC35E1Q96K37 410 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 GDAP1L1Q96MZ0 367 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF578Q96N58 590 aaPredicted RBP0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms