RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 ASCC1Q8N9N2 400 aaKnown RBP12.21□□□□□ -0.46
DNMT3A-204ENST00000380756 OR56A1Q8NGH5 318 aa12.21□□□□□ -0.46
DNMT3A-204ENST00000380756 PDLIM5Q96HC4 596 aaKnown RBP12.21□□□□□ -0.46
DNMT3A-204ENST00000380756 AHCYL2Q96HN2 611 aaKnown RBP12.21□□□□□ -0.46
DNMT3A-204ENST00000380756 RDH14Q9HBH5 336 aa12.21□□□□□ -0.46
DNMT3A-204ENST00000380756 TRIM36Q9NQ86 728 aa12.21□□□□□ -0.46
DNMT3A-204ENST00000380756 ZSCAN32Q9NX65 697 aa12.21□□□□□ -0.46
DNMT3A-204ENST00000380756 STON1Q9Y6Q2 735 aa12.21□□□□□ -0.46
DNMT3A-204ENST00000380756 NPIPB15A6NHN6 443 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 KLHL18O94889 574 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 GSRP00390 522 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 ALPPL2P10696 532 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 IFI30P13284 250 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 HSF2Q03933 536 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 CPZQ66K79 652 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 TMEM207Q6UWW9 146 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 SLC22A15Q8IZD6 547 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 SLC37A3Q8NCC5 494 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 SPACA7Q96KW9 195 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 GSDMCQ9BYG8 508 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 TUBB1Q9H4B7 451 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 CLMPQ9H6B4 373 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 NME7Q9Y5B8 376 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 B3GALT2O43825 422 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 OR12D1P0DN82 309 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 ADH5P11766 374 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 MLLT1Q03111 559 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 ILF3Q12906 894 aaKnown RBP eCLIP12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 UAP1L1Q3KQV9 507 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 ZNF691Q5VV52 312 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 C6orf120Q7Z4R8 191 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 GPR26Q8NDV2 337 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 OR2T11Q8NH01 316 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 PCDHGB6Q9Y5F9 930 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 RTCAO00442 366 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 RCBTB2O95199 551 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 AGR2O95994 175 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 ACRP10323 421 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 MTHFD2P13995 350 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 CD70P32970 193 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 RPL34P49207 117 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 NKX2-5P52952 324 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 SELENOWP63302 87 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 PITPNAQ00169 270 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 SLC3A1Q07837 685 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 C22orf42Q6IC83 251 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 SLC30A6Q6NXT4 461 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 LINGO2Q7L985 606 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 TOMM5Q8N4H5 51 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 OR9Q2Q8NGE9 314 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 LRR1Q96L50 414 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 KLHL31Q9H511 634 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 B3GNT3Q9Y2A9 372 aa12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 EXOSC1Q9Y3B2 195 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-204ENST00000380756 A0A1B0GTW7 788 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 SH3D21A4FU49 640 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 TMEM189-UBE2V1I3L0A0 370 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 GNB5O14775 395 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 ADAP00813 363 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 SERPINA3P01011 423 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 PEPDP12955 493 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 DDX6P26196 483 aaKnown RBP eCLIP12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 TEAD2Q15562 447 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 PNCKQ6P2M8 343 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 HDDC3Q8N4P3 179 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 CNDP2Q96KP4 475 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 IL17FQ96PD4 163 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 TMEM246Q9BRR3 403 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 BEX2Q9BXY8 128 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 IRF2BPLQ9H1B7 796 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 SACM1LQ9NTJ5 587 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 MARK1Q9P0L2 795 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 PCDHGB1Q9Y5G3 927 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 CLCA3PQ9Y6N3 262 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 HLA-EP13747 358 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 GBX2P52951 348 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 ZNF33BQ06732 778 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 PTGES3Q15185 160 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 TAF13Q15543 124 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 SLC14A2Q15849 920 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 SMN1Q16637 294 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 IER5LQ5T953 404 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 POMZP3Q6PJE2 187 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 OR8H3Q8N146 312 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 NEIL3Q8TAT5 605 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 OSTF1Q92882 214 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 MS4A4AQ96JQ5 239 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 TEX37Q96LM6 180 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 CD180Q99467 661 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 MCHR1Q99705 422 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 NDC1Q9BTX1 674 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 STOX2Q9P2F5 926 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 WDR45Q9Y484 360 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 INMT-MINDY4F8WBC2 141 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 AXIN1O15169 862 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 PRR23CQ6ZRP0 262 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 LHFPL3Q86UP9 236 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 POF1BQ8WVV4 589 aa12.19□□□□□ -0.46
DNMT3A-204ENST00000380756 ZNF300Q96RE9 604 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms