RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SLC19A2O60779 497 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 PFKLP17858 780 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 IVDP26440 423 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 DEFA5Q01523 94 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 DOC2AQ14183 400 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 SIX1Q15475 284 aaPredicted RBP15.42■□□□□ 0.06
COL2A1-202ENST00000380518 ODF4Q2M2E3 257 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 SPATC1Q76KD6 591 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 ZNF431Q8TF32 576 aaPredicted RBP15.42■□□□□ 0.06
COL2A1-202ENST00000380518 SLC7A6OSQ96CW6 309 aaPredicted RBP15.42■□□□□ 0.06
COL2A1-202ENST00000380518 PLEKHA6Q9Y2H5 1048 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 EMC8O43402 210 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 STC2O76061 302 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 ZNF41P51814 821 aaPredicted RBP15.41■□□□□ 0.06
COL2A1-202ENST00000380518 CLDN8P56748 225 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 ARPC4P59998 168 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 RPS21P63220 83 aaKnown RBP15.41■□□□□ 0.06
COL2A1-202ENST00000380518 EXOC3L2Q2M3D2 409 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 CYP27C1Q4G0S4 372 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 RPL13AP3Q6NVV1 102 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 ASPGQ86U10 573 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 GALNT12Q8IXK2 581 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 CREB3L1Q96BA8 519 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 PREBQ9HCU5 417 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 TNFRSF10BO14763 440 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 LATS1O95835 1130 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 FHP07954 510 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 OR2L2Q8NH16 312 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 ZNF778Q96MU6 729 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 ORAI3Q9BRQ5 295 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 SOX17Q9H6I2 414 aaPredicted RBP15.41■□□□□ 0.06
COL2A1-202ENST00000380518 PCDHB16Q9NRJ7 776 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 HTR3EA5X5Y0 456 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 DISC1C4P0D8 188 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 INMT-MINDY4F8WBC2 141 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 EIF1AYO14602 144 aaKnown RBP15.41■□□□□ 0.06
COL2A1-202ENST00000380518 RHOP08100 348 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 ARSDP51689 593 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 PLGLB1Q02325 96 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 CES4AQ5XG92 561 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 NEIL3Q8TAT5 605 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 SETD7Q8WTS6 366 aaKnown RBP15.41■□□□□ 0.06
COL2A1-202ENST00000380518 SH3YL1Q96HL8 342 aaPredicted RBP15.41■□□□□ 0.06
COL2A1-202ENST00000380518 SGIP1Q9BQI5 828 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 SLC2A11Q9BYW1 496 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 HPF1Q9NWY4 346 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 HSPB11Q9Y547 144 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 DNAJC15Q9Y5T4 150 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 TEX13DA0A0J9YY54 714 aaPredicted RBP15.41■□□□□ 0.06
COL2A1-202ENST00000380518 ISPDA4D126 451 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 KLHL33A6NCF5 533 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 HLCSP50747 726 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 GNG2P59768 71 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 TBPL1P62380 186 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 GRM2Q14416 872 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 TRAM1Q15629 374 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 KBTBD6Q86V97 674 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 TMEM41AQ96HV5 264 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 HSPA12BQ96MM6 686 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 G6PC3Q9BUM1 346 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 PRTFDC1Q9NRG1 225 aa15.41■□□□□ 0.06
COL2A1-202ENST00000380518 C14orf166Q9Y224 244 aaKnown RBP15.41■□□□□ 0.06
COL2A1-202ENST00000380518 PEAK1Q9H792 1746 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 SLC35F4A4IF30 521 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 ZNF860A6NHJ4 632 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 SYN1P17600 705 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 GLP1RP43220 463 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 OR4D2P58180 307 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 ACTC1P68032 377 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 ACTA1P68133 377 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 ELAVL3Q14576 367 aaKnown RBP15.4■□□□□ 0.06
COL2A1-202ENST00000380518 NUP43Q8NFH3 380 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 OR5M3Q8NGP4 307 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 OR6N2Q8NGY6 317 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 ZNF451Q9Y4E5 1061 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 PTGDR2Q9Y5Y4 395 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 C1orf226A1L170 272 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 PEX12O00623 359 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 SNAPC5O75971 98 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 DCKP27707 260 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 GSCP56915 257 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-202ENST00000380518 E2F1Q01094 437 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 CLCA4Q14CN2 919 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 KCTD18Q6PI47 426 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-202ENST00000380518 SAMD12Q8N8I0 201 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 TMEM234Q8WY98 164 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 ZNF689Q96CS4 500 aaPredicted RBP15.4■□□□□ 0.06
COL2A1-202ENST00000380518 RTP4Q96DX8 246 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 MVB12BQ9H7P6 319 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 TBCCD1Q9NVR7 557 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 EXTL2Q9UBQ6 330 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 TPD52L2O43399 206 aaKnown RBP15.4■□□□□ 0.06
COL2A1-202ENST00000380518 RNF13O43567 381 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 NUAK1O60285 661 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 GRIA2P42262 883 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 MAGEA12P43365 314 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 NPRL3Q12980 569 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 SLC36A3Q495N2 470 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 P4HA3Q7Z4N8 544 aa15.4■□□□□ 0.06
COL2A1-202ENST00000380518 UBE2Q1Q7Z7E8 422 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms