RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 OR4C11Q6IEV9 310 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 WASH2PQ6VEQ5 465 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 VTCN1Q7Z7D3 282 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 TRIM69Q86WT6 500 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ERI1Q8IV48 349 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 HS3ST5Q8IZT8 346 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CHDHQ8NE62 594 aaPredicted RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 FLCNQ8NFG4 579 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 OR52E1Q8NGJ3 308 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 OR2A1Q8NGT9 310 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 FBLIM1Q8WUP2 373 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 NEURL3Q96EH8 262 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ZBED6CLQ96FA7 236 aaPredicted RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 TPD52L3Q96J77 140 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 MPP4Q96JB8 637 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 APOL4Q9BPW4 351 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 FAIM2Q9BWQ8 316 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 MRPS30Q9NP92 439 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 GPATCH2Q9NW75 528 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 VNN3Q9NY84 501 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 TAS2R7Q9NYW3 318 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 TMEM9Q9P0T7 183 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 KIF17Q9P2E2 1029 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF451Q9Y4E5 1061 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 U3KQV3 271 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 MAP1BP46821 2468 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 PRSS38A1L453 326 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 TOR1BO14657 336 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 PRICKLE3O43900 615 aaPredicted RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ADAM23O75077 832 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 PDE9AO76083 593 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 APBB3O95704 486 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 EGFP01133 1207 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ACADMP11310 421 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CRHBPP24387 322 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 PIGAP37287 484 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CXCR4P61073 352 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ISL1P61371 349 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CYP4F2P78329 520 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 EEF1A2Q05639 463 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 GRSF1Q12849 480 aaKnown RBP eCLIP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 NFATC4Q14934 902 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CLCA4Q14CN2 919 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 C16orf72Q14CZ0 275 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ZIC1Q15915 447 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 RPE65Q16518 533 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 SLC5A12Q1EHB4 618 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 EOGTQ5NDL2 527 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 COX20Q5RI15 118 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 FAHD1Q6P587 224 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF852Q6ZMS4 543 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 DGLUCYQ7Z3D6 616 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ADCK2Q7Z695 626 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 RNF130Q86XS8 419 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ARMC8Q8IUR7 673 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 UBALD2Q8IYN6 164 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ADGRF3Q8IZF5 1079 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 SRFBP1Q8NEF9 429 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 OR10Q1Q8NGQ4 319 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 NFKBIDQ8NI38 313 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 PSMA8Q8TAA3 256 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CREB3L4Q8TEY5 395 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 GEMIN6Q8WXD5 167 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 DNASE1L2Q92874 299 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 SORBS1Q9BX66 1292 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 RUBCNLQ9H714 662 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 SLC24A3Q9HC58 644 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 A4GALTQ9NPC4 353 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 PDP1Q9P0J1 537 aaPredicted RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 MOSPD1Q9UJG1 213 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 PCDHGA8Q9Y5G5 932 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 NUP214P35658 2090 aaPredicted RBP9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 A0A0A6YYD5 115 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 FEZF1A0PJY2 475 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 TNFRSF10CO14798 259 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 MRPS14O60783 128 aaKnown RBP9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 NOL3O60936 208 aaKnown RBP9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 GCM2O75603 506 aaPredicted RBP9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 TRMUO75648 421 aaKnown RBP9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 PRKACGP22612 351 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 EEF1B2P24534 225 aaKnown RBP9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 DCKP27707 260 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 HTR1BP28222 390 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 ELK4P28324 431 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 SSR2P43308 183 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 DAPP51397 102 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 CRYBA2P53672 197 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 MANFP55145 182 aaKnown RBP9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 PCBP3P57721 371 aaKnown RBP9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 PCBP4P57723 403 aaKnown RBP9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 NUP107P57740 925 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 CD47Q08722 323 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 ANGPT1Q15389 498 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 PRSS53Q2L4Q9 553 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 ADPRMQ3LIE5 342 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 REEP3Q6NUK4 255 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 KCTD8Q6ZWB6 473 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 CEP68Q76N32 757 aa9.96□□□□□ -0.82
POLR2J3-201ENST00000379340 GALNT10Q86SR1 603 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms