RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CCDC85CA6NKD9 419 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 HRO43593 1189 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 INHAP05111 366 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 STSP08842 583 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 PTPN6P29350 595 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 LIPAP38571 399 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 KIR2DL3P43628 341 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 CLCN5P51795 746 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 POLR2JP52435 117 aaKnown RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 TBCEQ15813 527 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SLC25A52Q3SY17 297 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SH3PXD2AQ5TCZ1 1133 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF549Q6P9A3 640 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 BOLLQ8N9W6 283 aaKnown RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SMARCD1Q96GM5 515 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SHARPINQ9H0F6 387 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 UNKLQ9H9P5 680 aaKnown RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ABCC13Q9NSE7 274 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 TMEM248Q9NWD8 314 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 AKAP11Q9UKA4 1901 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 A0A1B0GWJ7 208 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 CLN5O75503 358 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ALDOAP04075 364 aaKnown RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 PPP3CBP16298 524 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SERPINF1P36955 418 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 CDH11P55287 796 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 DUSP4Q13115 394 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 DGKZQ13574 1117 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 C1orf220Q5T0J3 134 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 CD276Q5ZPR3 534 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SAXO2Q658L1 398 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ULK3Q6PHR2 472 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 TFAP2EQ6VUC0 442 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 GDPGP1Q6ZNW5 385 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 USP30Q70CQ3 517 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 HSD17B13Q7Z5P4 300 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 MRPL10Q7Z7H8 261 aaKnown RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 IZUMO1Q8IYV9 350 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF283Q8N7M2 679 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 WDR20Q8TBZ3 569 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 EDEM2Q9BV94 578 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 METTL9Q9H1A3 318 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 NANSQ9NR45 359 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SEMA3GQ9NS98 782 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 TREM2Q9NZC2 230 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 AGO1Q9UL18 857 aaKnown RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SAMD4AQ9UPU9 718 aaKnown RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 AZIN1O14977 448 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 MT-CYBP00156 380 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ANXA8P13928 327 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SLC2A4P14672 509 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 CYP2B6P20813 491 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 HTR1EP28566 365 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 RPS19P39019 145 aaKnown RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF234Q14588 700 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 HSDL1Q3SXM5 330 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ANXA8L1Q5VT79 327 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 MLIPQ5VWP3 458 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 FSTL4Q6MZW2 842 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 H3F3CQ6NXT2 135 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SLC51AQ86UW1 340 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 C12orf40Q86WS4 652 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 DNAJC22Q8N4W6 341 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 TMEM74Q96NL1 305 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF559Q9BR84 538 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SRRQ9GZT4 340 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF350Q9GZX5 532 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ANKRD12Q6UB98 2062 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 CXCL11O14625 94 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 DDNO94850 711 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 RLN1P04808 185 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 GJB1P08034 283 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 HAPLN1P10915 354 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 MNDAP41218 407 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 CCR10P46092 362 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 EIF5AP63241 154 aaKnown RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 OGDHQ02218 1023 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 NDUFAF6Q330K2 333 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 CLEC6AQ6EIG7 209 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ACBD4Q8NC06 268 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ARL11Q969Q4 196 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 NCOR1P1Q9H4R4 102 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 METTL17Q9H7H0 456 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-202ENST00000378161 COA4Q9NYJ1 87 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 MUTYHQ9UIF7 546 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 FZD1Q9UP38 647 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 DHRS7Q9Y394 339 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 NUBP2Q9Y5Y2 271 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 ROBO1Q9Y6N7 1651 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 CACNB4O00305 520 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 CXCR6O00574 342 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 SCAMP3O14828 347 aaKnown RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 VNN2O95498 520 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 PSMD8P48556 350 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 GATMP50440 423 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 SEMA5AQ13591 1074 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 PPA1Q15181 289 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms