RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CRB3Q9BUF7 120 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 LYARQ9NX58 379 aaKnown RBP10.4□□□□□ -0.74
HIF3A-205ENST00000377670 FKBP7Q9Y680 259 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 OR2AT4A6NND4 320 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 APOC1P02654 83 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 PRSS56P0CW18 603 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 PRPS2P11908 318 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 GANABQ14697 944 aaKnown RBP10.4□□□□□ -0.74
HIF3A-205ENST00000377670 IQCCQ4KMZ1 466 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 SMYD5Q6GMV2 418 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 SMARCD3Q6STE5 483 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 ASPGQ86U10 573 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 SLC5A8Q8N695 610 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 CSNK1A1LQ8N752 337 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 OR10H4Q8NGA5 316 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 GAL3ST1Q99999 423 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 ZDHHC2Q9UIJ5 367 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 DDX60LQ5H9U9 1706 aaKnown RBP10.4□□□□□ -0.74
HIF3A-205ENST00000377670 KLHL33A6NCF5 533 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 CHP2O43745 196 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 DLX3O60479 287 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 PRH1P02810 166 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 DBIP07108 87 aaKnown RBP10.4□□□□□ -0.74
HIF3A-205ENST00000377670 ECHS1P30084 290 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 EIF2S3P41091 472 aaKnown RBP10.4□□□□□ -0.74
HIF3A-205ENST00000377670 TUBA3CQ13748 450 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 RAB39AQ14964 217 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 GTF2IRD2BQ6EKJ0 949 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 GTF2IRD2Q86UP8 949 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 OR4C6Q8NH72 309 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 GRHL3Q8TE85 626 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 SLC5A11Q8WWX8 675 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 TMEM234Q8WY98 164 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 YIPF4Q9BSR8 244 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 MRM3Q9HC36 420 aaKnown RBP10.4□□□□□ -0.74
HIF3A-205ENST00000377670 TBCCD1Q9NVR7 557 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 ZNF69Q9UC07 566 aa10.4□□□□□ -0.74
HIF3A-205ENST00000377670 STC2O76061 302 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 PLCXD2Q0VAA5 305 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 IFI44LQ53G44 452 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 C1orf94Q6P1W5 598 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 TRAM1L1Q8N609 369 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 PACRGLQ8N7B6 248 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 OR2L5Q8NG80 312 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 SEC14L1Q92503 715 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 SCAMP4Q969E2 229 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 CASD1Q96PB1 797 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 PSKH2Q96QS6 385 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 BARD1Q99728 777 aaKnown RBP10.4□□□□□ -0.75
HIF3A-205ENST00000377670 MGME1Q9BQP7 344 aa10.4□□□□□ -0.75
HIF3A-205ENST00000377670 PELOQ9BRX2 385 aaKnown RBP10.4□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF860A6NHJ4 632 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 SEC14L5O43304 696 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 PRAMEF11O60813 436 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ECI2O75521 394 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 MAOBP27338 520 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 NOVA1P51513 510 aaKnown RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 BTBD16Q32M84 506 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 CDHR3Q6ZTQ4 885 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 SLC37A3Q8NCC5 494 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 OR14L1PQ8NHC6 308 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF431Q8TF32 576 aaPredicted RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 TMEM203Q969S6 136 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ISOC1Q96CN7 298 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 WDR77Q9BQA1 342 aaPredicted RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 LRRC3Q9BY71 257 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 TWSG1Q9GZX9 223 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 CST11Q9H112 138 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 LINC00597Q9H2U6 94 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 STOX2Q9P2F5 926 aaPredicted RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 A0A1W2PRB8 838 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ITGBL1O95965 494 aaPredicted RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ADRB3P13945 408 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 EPHA4P54764 986 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 VLDLRP98155 873 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 CBFBQ13951 182 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 TMEM225Q6GV28 225 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 THOC6Q86W42 341 aaKnown RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF761Q86XN6 746 aaPredicted RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 NATD1Q8N6N6 113 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 AGBL5Q8NDL9 886 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 CDC6Q99741 560 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 IL1RAPQ9NPH3 570 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 SLCO3A1Q9UIG8 710 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 OR1A2Q9Y585 309 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 CDK5RAP2Q96SN8 1893 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 EFCAB7A8K855 629 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 A8MT66 165 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 BRINP1O60477 761 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 APOL3O95236 402 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 C8BP07358 591 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 GSTT2BP0CG30 244 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 PCSK2P16519 638 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 AFF3P51826 1226 aaKnown RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 RING1Q06587 406 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 HMBOX1Q6NT76 420 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ARMC10Q8N2F6 343 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 DIO2Q92813 273 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 PMM1Q92871 262 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 GLYATL1Q969I3 302 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms