RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 OR8S1Q8NH09 359 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 HSPA12BQ96MM6 686 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 SEC14L4Q9UDX3 406 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 SCO2O43819 266 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 KCNC1P48547 511 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 SLC9A3P48764 834 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 DUSP3P51452 185 aaPredicted RBP18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 MAB21L1Q13394 359 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 CASTOR1Q8WTX7 329 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 JPH3Q8WXH2 748 aaPredicted RBP18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 ZFR2Q9UPR6 939 aaKnown RBP18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 DFNA5O60443 496 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 GSTT2P0CG29 244 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 CD1DP15813 335 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 DDX1Q92499 740 aaKnown RBP18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 SEC14L1Q92503 715 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 IMP4Q96G21 291 aaKnown RBP18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 LRIG1Q96JA1 1093 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 ZNF350Q9GZX5 532 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 MKLN1Q9UL63 735 aa18.27■□□□□ 0.52
TBC1D4-201ENST00000377625 M0R036 132 aa18.27■□□□□ 0.51
TBC1D4-201ENST00000377625 HRH2P25021 359 aa18.27■□□□□ 0.51
TBC1D4-201ENST00000377625 JAG1P78504 1218 aa18.27■□□□□ 0.51
TBC1D4-201ENST00000377625 FAM76BQ5HYJ3 339 aa18.27■□□□□ 0.51
TBC1D4-201ENST00000377625 NUP43Q8NFH3 380 aa18.27■□□□□ 0.51
TBC1D4-201ENST00000377625 J3QRK9 145 aa18.27■□□□□ 0.51
TBC1D4-201ENST00000377625 LEPRP48357 1165 aaKnown RBP18.27■□□□□ 0.51
TBC1D4-201ENST00000377625 FBXL8Q96CD0 374 aa18.27■□□□□ 0.51
TBC1D4-201ENST00000377625 FGF3P11487 239 aaPredicted RBP18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 ARSFP54793 590 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 FXYD6P3P58550 94 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 GLT8D1Q68CQ7 371 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 KRTCAP2Q8N6L1 136 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 A0A096LPI6 279 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 RNF144AP50876 292 aaPredicted RBP18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 RING1Q06587 406 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 UBE2Q1Q7Z7E8 422 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 GPR34Q9UPC5 381 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 RNGTTO60942 597 aaKnown RBP18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 ENTPD1P49961 510 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 PSMA6P60900 246 aaKnown RBP18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 SLAMF1Q13291 335 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 SGCAQ16586 387 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 NKAPLQ5M9Q1 402 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 PLEKHG7Q6ZR37 379 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 POGLUT1Q8NBL1 392 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 PSD4Q8NDX1 1056 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 OR8J3Q8NGG0 315 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 BHMG1C9JSJ3 638 aaPredicted RBP18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 HOXD13P35453 343 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 PTGR1Q14914 329 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 ATG9BQ674R7 924 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 IGSF8Q969P0 613 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 MRGPRX2Q96LB1 330 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 NSUN5Q96P11 429 aaKnown RBP18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 FCRL3Q96P31 734 aaPredicted RBP18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 DEFB126Q9BYW3 111 aa18.26■□□□□ 0.51
TBC1D4-201ENST00000377625 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 FBLP22087 321 aaKnown RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 TIA1P31483 386 aaKnown RBP eCLIP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 HNRNPA0Q13151 305 aaKnown RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 GAS6Q14393 721 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 DEFB134Q4QY38 66 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 TTLL10Q6ZVT0 673 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 KBTBD6Q86V97 674 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 TMEM121BQ9BXQ6 578 aaPredicted RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 GABRQQ9UN88 632 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 MYO5BQ9ULV0 1848 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 H2BFMP0C1H6 154 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 ZNF84P51523 738 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 MRPL49Q13405 166 aaKnown RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 CDKL4Q5MAI5 379 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 KCTD18Q6PI47 426 aaPredicted RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 MYOCOSA0A1B0GUC4 107 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 LRRN3E7EW58 273 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 PLCXD2Q0VAA5 305 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 THAP3Q8WTV1 239 aaPredicted RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 AKAP1Q92667 903 aaKnown RBP eCLIP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 TGM7Q96PF1 710 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 OR10A4Q9H209 315 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 LRRN3Q9H3W5 708 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 PTBP2Q9UKA9 531 aaKnown RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 FBXL3Q9UKT7 428 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 HCN2Q9UL51 889 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 E2F3O00716 465 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 IST1P53990 364 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 EIF2S3LQ2VIR3 472 aaKnown RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 SFT2D3Q587I9 215 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 SLC27A4Q6P1M0 643 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 C3orf33Q6P1S2 294 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 ZNF431Q8TF32 576 aaPredicted RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 C12orf43Q96C57 262 aaKnown RBP18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 RMI1Q9H9A7 625 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 MEAF6Q9HAF1 191 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 ERVK-18Q9QC07 812 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 PADI2Q9Y2J8 665 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 UNC119BA6NIH7 251 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 OR5K4A6NMS3 321 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 C1orf61Q13536 156 aa18.25■□□□□ 0.51
TBC1D4-201ENST00000377625 OR2T33Q8NG76 320 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms