RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 RNF31Q96EP0 1072 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PSKH2Q96QS6 385 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 MARK1Q9P0L2 795 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 SLC27A6Q9Y2P4 619 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 MCM3APO60318 1980 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 LOC100509620A0A075B734 347 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ONECUT3O60422 494 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF26P17031 533 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 MC1RQ01726 317 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 RGNQ15493 299 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 DPY19L3Q6ZPD9 716 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ZSWIM9Q86XI8 627 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PROKR1Q8TCW9 393 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 GNPDA2Q8TDQ7 276 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 TRIB2Q92519 343 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ELL3Q9HB65 397 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PCDHGB6Q9Y5F9 930 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ZNFX1Q9P2E3 1918 aaKnown RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 URADA6NGE7 173 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 H7BY64 318 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 FGF4P08620 206 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 DAPP51397 102 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 TMEM115Q12893 351 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF630Q2M218 657 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 EIPR1Q53HC9 387 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ANKRD34AQ69YU3 496 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 LHFPL3Q86UP9 236 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 SERINC5Q86VE9 423 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 B3GNT7Q8NFL0 401 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 OR9A1PQ8NGU1 263 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 FOXJ1Q92949 421 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PRAP1Q96NZ9 151 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 MBOAT4Q96T53 435 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PHPT1Q9NRX4 125 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PCDH10Q9P2E7 1040 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PFDN2Q9UHV9 154 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 MKL2Q9ULH7 1088 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 SLC31A1O15431 190 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 SMAD6O43541 496 aaKnown RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 KDM4BO94953 1096 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ALPLP05186 524 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 BMP4P12644 408 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 KELP23276 732 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 STOMP27105 288 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 CLDN8P56748 225 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 INHBEP58166 350 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 HYAL2Q12891 473 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 XKR4Q5GH76 650 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PLEKHS1Q5SXH7 462 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 TPGS2Q68CL5 300 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ASCC1Q8N9N2 400 aaKnown RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PJA1Q8NG27 643 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF354BQ96LW1 612 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PHOX2BQ99453 314 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 OR2B2Q9GZK3 357 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 CD300AQ9UGN4 299 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 MKLN1Q9UL63 735 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 COLEC10Q9Y6Z7 277 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ANHXE9PGG2 379 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 POP7O75817 140 aaKnown RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 FGF19O95750 216 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 EPOP01588 193 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 SLC10A3P09131 477 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 IDSP22304 550 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ITGA3P26006 1051 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 KCNC1P48547 511 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 AP1S2P56377 157 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 PITPNAQ00169 270 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 LRRC32Q14392 662 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 BRAT1Q6PJG6 821 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 Q6ZVL8 140 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 Q8N402 240 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 TMEM151AQ8N4L1 468 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 CHST14Q8NCH0 376 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 C16orf78Q8WTQ4 265 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 EPYCQ99645 322 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 MTIF3Q9H2K0 278 aaKnown RBP6.28□□□□□ -1.4
SMC1A-202ENST00000375340 ENAMQ9NRM1 1142 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 KCNK6Q9Y257 313 aa6.28□□□□□ -1.4
SMC1A-202ENST00000375340 SCN1AP35498 2009 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 B3GALT4O96024 378 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 PTPN2P17706 415 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 STXBP1P61764 594 aaKnown RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 OR52E4Q8NGH9 312 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ATOH8Q96SQ7 321 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 CLMPQ9H6B4 373 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 NMNAT1Q9HAN9 279 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 DEC1Q9P2X7 70 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 TBC1D24Q9ULP9 559 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 DLGAP1O14490 977 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 FKTNO75072 461 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ENTPD6O75354 484 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 SRPRAP08240 638 aaKnown RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 HOXD12P35452 270 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 TGFBR1P36897 503 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 RAB8AP61006 207 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 LASP1Q14847 261 aaKnown RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 SAMD12Q8N8I0 201 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 GON4LQ3T8J9 2241 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 CAPN5O15484 640 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms