RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 TMEM178AQ8NBL3 297 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 MNS1Q8NEH6 495 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 NCLNQ969V3 563 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 CMTM7Q96FZ5 175 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 GPR137Q96N19 417 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 SORBS1Q9BX66 1292 aaKnown RBP16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 OR51B5Q9H339 312 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 ZBTB26Q9HCK0 441 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 KLHL1Q9NR64 748 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 PSD3Q9NYI0 1048 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 ADGRE2Q9UHX3 823 aa16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 MRPS33Q9Y291 106 aaKnown RBP16.75■□□□□ 0.27
TRAPPC3-202ENST00000373162 CRYBG3Q68DQ2 2970 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 CELSR2Q9HCU4 2923 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 A0A1B0GUH1 482 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 OR7A17O14581 309 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 SLC25A12O75746 678 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 ETHE1O95571 254 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 TUBB4AP04350 444 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 CTAGE8P0CG41 777 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 CD46P15529 392 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 EEF1DP29692 281 aaKnown RBP16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 CA7P43166 264 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 SERPINB9P50453 376 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 TGM3Q08188 693 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 SLC13A2Q13183 592 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 GTF2H2Q13888 395 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 UAP1Q16222 522 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 C1QL3Q5VWW1 255 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 GTF2H2CQ6P1K8 395 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 GFRALQ6UXV0 394 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 Q6ZPB1 254 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 CLNKQ7Z7G1 428 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 CTAGE4Q8IX94 777 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 ZCCHC7Q8N3Z6 543 aaKnown RBP16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 DEFB126Q9BYW3 111 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 COPS7BQ9H9Q2 264 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 PNO1Q9NRX1 252 aaKnown RBP16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 SEC14L3Q9UDX4 400 aa16.74■□□□□ 0.27
TRAPPC3-202ENST00000373162 STX16-NPEPL1H3BU86 382 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 STX16O14662 325 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 ZG16O60844 167 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 ABHD2P08910 425 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 PCNAP12004 261 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 COL6A2P12110 1019 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 GFAPP14136 432 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 COL8A1P27658 744 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 BSGP35613 385 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 CYB561P49447 251 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 OC90Q02509 493 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 TRAF3Q13114 568 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 RCN2Q14257 317 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 OR4C11Q6IEV9 310 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 CHSY3Q70JA7 882 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 HORMAD2Q8N7B1 307 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 ZNF321PQ8N8H1 164 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 MORN4Q8NDC4 146 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 OR52B6Q8NGF0 335 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 ZNF592Q92610 1267 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 ALOXE3Q9BYJ1 711 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 TXLNGYQ9BZA5 131 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 VPS11Q9H270 941 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 XPR1Q9UBH6 696 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 PCTPQ9UKL6 214 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 PCDHGA11Q9Y5H2 935 aa16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 TNPO3Q9Y5L0 923 aaKnown RBP16.73■□□□□ 0.27
TRAPPC3-202ENST00000373162 A0A0A6YYD5 115 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 KIF2AO00139 706 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 SAP18O00422 153 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 FGF17O60258 216 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 LDB3O75112 727 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 SH3BGRLO75368 114 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 ITGA10O75578 1167 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 INHBAP08476 426 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 RPS17P08708 135 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 CNTFP26441 200 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 DCTP40126 519 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 SSR2P43308 183 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 HNRNPH2P55795 449 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 RPS13P62277 151 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 CUL3Q13618 768 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 SERTAD2Q14140 314 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 C16orf47Q6ZP98 133 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 FGD2Q7Z6J4 655 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 FJX1Q86VR8 437 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 TMEM132CQ8N3T6 1108 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 PTGR2Q8N8N7 351 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 OR8K3Q8NH51 312 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 IFT81Q8WYA0 676 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 MTERF1Q99551 399 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 NTMT1Q9BV86 223 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 C1QTNF3Q9BXJ4 246 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 EPB41L4BQ9H329 900 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 DDX31Q9H8H2 851 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 IPPKQ9H8X2 491 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 CPSF2Q9P2I0 782 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 RNF11Q9Y3C5 154 aa16.72■□□□□ 0.27
TRAPPC3-202ENST00000373162 ASB4Q9Y574 426 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms