RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 WDR1O75083 606 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 IFNA16P05015 189 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 GDF5P43026 501 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 MAGEA5P43359 124 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 PLA2G16P53816 162 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 MTTPP55157 894 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 RNF4P78317 190 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 FRG1Q14331 258 aaKnown RBP12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 SLBPQ14493 270 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 SLC10A1Q14973 349 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 PPP1R7Q15435 360 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 SLC25A35Q3KQZ1 300 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 TRIM40Q6P9F5 258 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 ABHD17CQ6PCB6 329 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 TRMT10BQ6PF06 316 aaKnown RBP12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 OPN5Q6U736 354 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 ARSKQ6UWY0 536 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 CLNKQ7Z7G1 428 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 TGIF2LYQ8IUE0 185 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 ACTRT1Q8TDG2 376 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 CCT6BQ92526 530 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 KIAA1191Q96A73 305 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 SARAFQ96BY9 339 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 RHBDF1Q96CC6 855 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 EGFL8Q99944 293 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 REXO4Q9GZR2 422 aaKnown RBP12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 EHD1Q9H4M9 534 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 SACM1LQ9NTJ5 587 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 CCM2LQ9NUG4 571 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 DNAJB12Q9NXW2 375 aaKnown RBP12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 GPRC5BQ9NZH0 403 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 Q9UFV3 132 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 ACAD8Q9UKU7 415 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 LIPGQ9Y5X9 500 aa12.11□□□□□ -0.47
TRAPPC3-201ENST00000373159 NPEPPSL1A6NEC2 478 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 ANKDD1BA6NHY2 528 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 FAM47E-STBD1D6RA91 191 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 G3V3Y1 287 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 HCN1O60741 890 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 ZNF354AO60765 605 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 WDR47O94967 919 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 HOXB4P17483 251 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 ADH7P40394 386 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 MAN2A2P49641 1150 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 STX4Q12846 297 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 SERTAD2Q14140 314 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 MPEG1Q2M385 716 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 C18orf21Q32NC0 220 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 WLSQ5T9L3 541 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 STEAP4Q687X5 459 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 FAM47EQ6ZV65 393 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 VN1R5Q7Z5H4 357 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 ADAMTSL2Q86TH1 951 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 ZC3HC1Q86WB0 502 aaKnown RBP12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 LRRC8AQ8IWT6 810 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 PDIK1LQ8N165 341 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 C7orf57Q8NEG2 295 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 CSF3RQ99062 836 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 OR8D2Q9GZM6 311 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 LYRM4Q9HD34 91 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 PRDM7Q9NQW5 492 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 CTNNAL1Q9UBT7 734 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 ZNF490Q9ULM2 529 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 PPP2R2CQ9Y2T4 447 aa12.1□□□□□ -0.47
TRAPPC3-201ENST00000373159 GOLGA6L10A0A0M3HER8 536 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 ATP6AP2A0A1C7CYW4 349 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 C17orf105B2RV13 164 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 SYT5O00445 386 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 ATP6AP2O75787 350 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 P04436 131 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 CELA3AP09093 270 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 GABRA1P14867 456 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 TNNI3P19429 210 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 IVDP26440 423 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 CERS1P27544 350 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 GGT5P36269 586 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 PEX19P40855 299 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 ELK3P41970 407 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 DNASE1L1P49184 302 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 TAS2R39P59534 338 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 TGM3Q08188 693 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 TSNQ15631 228 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 PIGGQ5H8A4 983 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 C1orf185Q5T7R7 199 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 RIPPLY2Q5TAB7 128 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 ZNF321PQ8N8H1 164 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 SLC2A12Q8TD20 617 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 ANKRD49Q8WVL7 239 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 SLCO2A1Q92959 643 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 LRRC39Q96DD0 335 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 CFAP36Q96G28 342 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 POLDIP3Q9BY77 421 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 ROGDIQ9GZN7 287 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 LDAHQ9H6V9 325 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 COPS7BQ9H9Q2 264 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 SH2D2AQ9NP31 389 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 SEMA4BQ9NPR2 832 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 ZNF358Q9NW07 568 aa12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 TUBA8Q9NY65 449 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-201ENST00000373159 ASIC3Q9UHC3 531 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms