RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CLDN19Q8N6F1 224 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 OR51G2Q8NGK0 314 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 HDAC2Q92769 488 aaKnown RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 RAB7BQ96AH8 199 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 RHBDF1Q96CC6 855 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 ZNF382Q96SR6 550 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 URM1Q9BTM9 101 aaKnown RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 FN3KQ9H479 309 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 RETREG1Q9H6L5 497 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 HRASLS2Q9NWW9 162 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 KCTD3Q9Y597 815 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 GBAP04062 536 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 GPR143P51810 404 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 CREB5Q02930 508 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 UNQ6126/PRO20091Q6UXV3 157 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 TMPPEQ6ZT21 453 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 OR2T33Q8NG76 320 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 ASB12Q8WXK4 309 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 OR2M4Q96R27 311 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 MMP27Q9H306 513 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 DZANK1Q9NVP4 752 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 NUFIP1Q9UHK0 495 aaKnown RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 TMEM14AQ9Y6G1 99 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 A0A096LPI6 279 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 IFNA1P01562 189 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 FRKP42685 505 aaPredicted RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 SLC11A1P49279 550 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 RABL3Q5HYI8 236 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 SUSD1Q6UWL2 747 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 GRASPQ7Z6J2 395 aaPredicted RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 OR56A3Q8NH54 315 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 ZNF461Q8TAF7 563 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 MROQ9BYG7 248 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 EPHA6Q9UF33 1036 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 AJAP1Q9UKB5 411 aaPredicted RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 RBBP9O75884 186 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 GTF2F2P13984 249 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 FECHP22830 423 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 CASP6P55212 293 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 CDCA2Q69YH5 1023 aaPredicted RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 SLC27A4Q6P1M0 643 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 TWNKQ96RR1 684 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 EXTL2Q9UBQ6 330 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 ATPIF1Q9UII2 106 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 FBXL3Q9UKT7 428 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 OR5K4A6NMS3 321 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 TTLL8A6PVC2 850 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 CLCA1A8K7I4 914 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 INMT-MINDY4F8WBC2 141 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 H0YAE9 185 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 AURKAO14965 403 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 SOD2P04179 222 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 PRKACGP22612 351 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 FOXK1P85037 733 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 ELOAQ14241 798 aaKnown RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 GAS6Q14393 721 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 PCLAFQ15004 111 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 DCAF12L1Q5VU92 463 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 CARM1Q86X55 608 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 HS6ST2Q96MM7 605 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 NAA11Q9BSU3 229 aaPredicted RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 ZNF226Q9NYT6 803 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 LIPT1Q9Y234 373 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 MTMR11A4FU01 709 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 SLC35F4A4IF30 521 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 ZNF487B1APH4 448 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 SOX9P48436 509 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 RPS21P63220 83 aaKnown RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 RPA4Q13156 261 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 ATP6AP1Q15904 470 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 SGCAQ16586 387 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 ERN2Q76MJ5 926 aaKnown RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 TRAM1L1Q8N609 369 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 ZNF420Q8TAQ5 688 aaPredicted RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 ZNF675Q8TD23 568 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 MAFIPQ8WZ33 124 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 FBXL20Q96IG2 436 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 C1orf74Q96LT6 269 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 RNF39Q9H2S5 420 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 BACE2Q9Y5Z0 518 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 EMC8O43402 210 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 HCRTR2O43614 444 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 HPRP00739 348 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 OXTRP30559 389 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 VSX2P58304 361 aaPredicted RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 ID2Q02363 134 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 PPP1R8Q12972 351 aaKnown RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 FADDQ13158 208 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 ZNF829Q3KNS6 432 aaPredicted RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 KCNA7Q96RP8 456 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 PIP5K1AQ99755 562 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 ZNF701Q9NV72 531 aaPredicted RBP11.1□□□□□ -0.63
VCL-202ENST00000372755 PPP4R1LQ9P1A2 415 aa11.1□□□□□ -0.63
VCL-202ENST00000372755 TRIM64BA6NI03 449 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 GSRP00390 522 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 CSTAP01040 98 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 F7P08709 466 aaPredicted RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 DLDP09622 509 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms