RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SLC30A8Q8IWU4 369 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 C8orf59Q8N0T1 100 aaPredicted RBP13.42□□□□□ -0.26
LDB3-204ENST00000372066 TP53I13Q8NBR0 393 aaPredicted RBP13.42□□□□□ -0.26
LDB3-204ENST00000372066 C11orf65Q8NCR3 313 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 ABHD11Q8NFV4 315 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 OR4A15Q8NGL6 344 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 OR2T29Q8NH02 315 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 C16orf78Q8WTQ4 265 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 ZNF764Q96H86 408 aaPredicted RBP13.42□□□□□ -0.26
LDB3-204ENST00000372066 ORAI3Q9BRQ5 295 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 ADPRHL2Q9NX46 363 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 SH3BP4Q9P0V3 963 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 KNL1Q8NG31 2342 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 NUP214P35658 2090 aaPredicted RBP13.42□□□□□ -0.26
LDB3-204ENST00000372066 A0A1W2PP55 124 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 A0A1W2PPC4 97 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 ANKDD1BA6NHY2 528 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 OR6B1O95007 311 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 ZNF682O95780 498 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 B3GALT4O96024 378 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 FABP3P05413 133 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 CDH2P19022 906 aaPredicted RBP13.41□□□□□ -0.26
LDB3-204ENST00000372066 HLCSP50747 726 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 CCR8P51685 355 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 LSAMPQ13449 338 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 TOP3AQ13472 1001 aaPredicted RBP13.41□□□□□ -0.26
LDB3-204ENST00000372066 IRF4Q15306 451 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 RGNQ15493 299 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 INAVAQ3KP66 663 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 SPESP1Q6UW49 350 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 THAP5Q7Z6K1 395 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 OR52N2Q8NGI0 321 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 SLC6A18Q96N87 628 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 C1QTNF2Q9BXJ5 285 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 FTSJ1Q9UET6 329 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 SERGEFQ9UGK8 458 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 BLOC1S6Q9UL45 172 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 FZD4Q9ULV1 537 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 ICKQ9UPZ9 632 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 FREM2Q5SZK8 3169 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 DSPP15924 2871 aaKnown RBP13.41□□□□□ -0.26
LDB3-204ENST00000372066 CCDC160A6NGH7 325 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 LRRC72A6NJI9 287 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 PLRG1O43660 514 aaKnown RBP13.41□□□□□ -0.26
LDB3-204ENST00000372066 KDM1AO60341 852 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 NOBOXO60393 691 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 TGFB1P01137 390 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 ITGAMP11215 1152 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 FPR1P21462 350 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 GSTM2P28161 218 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 C2orf80Q0P641 193 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 TRIM40Q6P9F5 258 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 DHRS13Q6UX07 377 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 ISLR2Q6UXK2 745 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 TMEM26Q6ZUK4 368 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 GPR141Q7Z602 305 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 SLC9B2Q86UD5 537 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 GATAD2AQ86YP4 633 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 OFCC1Q8IZS5 231 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 ARL10Q8N8L6 244 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
LDB3-204ENST00000372066 ASB12Q8WXK4 309 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 HDAC2Q92769 488 aaKnown RBP13.41□□□□□ -0.26
LDB3-204ENST00000372066 TUBA1CQ9BQE3 449 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 ING2Q9H160 280 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 OR51B5Q9H339 312 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 TOR3AQ9H497 397 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 DKK4Q9UBT3 224 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 SLC23A2Q9UGH3 650 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 RSL24D1Q9UHA3 163 aaKnown RBP13.41□□□□□ -0.26
LDB3-204ENST00000372066 EXO1Q9UQ84 846 aaKnown RBP13.41□□□□□ -0.26
LDB3-204ENST00000372066 TDRKHQ9Y2W6 561 aaKnown RBP13.41□□□□□ -0.26
LDB3-204ENST00000372066 CEPT1Q9Y6K0 416 aa13.41□□□□□ -0.26
LDB3-204ENST00000372066 BAHCC1Q9P281 2608 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 A0A1B0GTQ1 180 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 ENO4A6NNW6 628 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 YY2O15391 372 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 SLC16A6O15403 523 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 KRT75O95678 551 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 NELFEP18615 380 aaKnown RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 DNAJA1P31689 397 aaKnown RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 CDK9P50750 372 aaKnown RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 ITGA1P56199 1179 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 GABARAPL2P60520 117 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 SGCGQ13326 291 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 GAB1Q13480 694 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 ZBED5Q49AG3 693 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 TMEM259Q4ZIN3 620 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 SOWAHCQ53LP3 525 aaPredicted RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 ZNF385BQ569K4 471 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 DEPDC1Q5TB30 811 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 KHDRBS2Q5VWX1 349 aaKnown RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 SETD9Q8NE22 299 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 TTLQ8NG68 377 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 OR4K1Q8NGD4 311 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 CNDP2Q96KP4 475 aaKnown RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 IL17FQ96PD4 163 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 ELF4Q99607 663 aaPredicted RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 MENTQ9BUN1 341 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms