RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CRISP1P54107 249 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 KCNJ10P78508 379 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 HOXC5Q00444 222 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 PTSQ03393 145 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 TEAD4Q15561 434 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 BAK1Q16611 211 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 NDUFA5Q16718 116 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ZSWIM7Q19AV6 140 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 LYPLAL1Q5VWZ2 237 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 SMARCD3Q6STE5 483 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 COMMD6Q7Z4G1 85 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ZNF614Q8N883 585 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 PDLIM5Q96HC4 596 aaKnown RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 TRMT61BQ9BVS5 477 aaKnown RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 TSSK6Q9BXA6 273 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 MARCH5Q9NX47 278 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ZNF624Q9P2J8 865 aaPredicted RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 MKLN1Q9UL63 735 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 PRELID1Q9Y255 219 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 HSPB11Q9Y547 144 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 MEIOCA2RUB1 952 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 SCO1O75880 301 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ALDH1A1P00352 501 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 CYP17A1P05093 508 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 CD22P20273 847 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 FKBP1BP68106 108 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 MICAQ29983 383 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ZXDCQ2QGD7 858 aaPredicted RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ZNF385BQ569K4 471 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 DCAF4L2Q8NA75 395 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ASB11Q8WXH4 323 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 KLHL6Q8WZ60 621 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 PIK3R3Q92569 461 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 SLC12A9Q9BXP2 914 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 TRIM45Q9H8W5 580 aaPredicted RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 H2AFY2Q9P0M6 372 aaPredicted RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ZNF282Q9UDV7 671 aaPredicted RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ZNF222Q9UK12 451 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 KIAA0100Q14667 2235 aaKnown RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 PCM1Q15154 2024 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 FEZF1A0PJY2 475 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ISPDA4D126 451 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 CCL16O15467 120 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 IGLV3-27P01718 113 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 NR2F6P10588 404 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 DDX5P17844 614 aaKnown RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 SDC2P34741 201 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ASMTP46597 345 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 DSTNP60981 165 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 B4GALNT1Q00973 533 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 CRB2Q5IJ48 1285 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 LRIF1Q5T3J3 769 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 MACC1Q6ZN28 852 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 HSD11B1LQ7Z5J1 315 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 LAPTM4BQ86VI4 370 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 TMEM25Q86YD3 366 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 GALNT13Q8IUC8 556 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 OR5D16Q8NGK9 328 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ZNF461Q8TAF7 563 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 EFHD2Q96C19 240 aaPredicted RBP10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ARSGQ96EG1 525 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 ZNF226Q9NYT6 803 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 DKK3Q9UBP4 350 aa10.55□□□□□ -0.72
NECTIN4-201ENST00000368012 GRXCR2A6NFK2 248 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 MANSC4A6NHS7 340 aaPredicted RBP10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 AOC2O75106 756 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 UGT2B17O75795 530 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 PTTG1O95997 202 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 JUNDP17535 347 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 GPX2P18283 190 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 MAPK12P53778 367 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 PFN3P60673 137 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 CXCR4P61073 352 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 E2F2Q14209 437 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 KLHL12Q53G59 568 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 FRMPD2BQ6IN97 320 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 MTFR2Q6P444 385 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 CALHM3Q86XJ0 350 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 RELTQ969Z4 430 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 TMCO6Q96DC7 493 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 CLCA2Q9UQC9 943 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 Q9Y3F1 56 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 CEP290O15078 2479 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 C2orf92A0A1B0GVN3 265 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 A0A1W2PPK0 400 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 CYBAP13498 195 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 NAT1P18440 290 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 CELP19835 753 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 MYL9P24844 172 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 HTR2BP41595 481 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 GINS1Q14691 196 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 FXNQ16595 210 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 WDR53Q7Z5U6 358 aaPredicted RBP10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 ELMOD2Q8IZ81 293 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 NLGN4YQ8NFZ3 816 aaPredicted RBP10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 OR8H1Q8NGG4 311 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 LRR1Q96L50 414 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 F2RL3Q96RI0 385 aa10.54□□□□□ -0.72
NECTIN4-201ENST00000368012 UCK2Q9BZX2 261 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms