RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CLEC4DQ8WXI8 215 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 DOCK6Q96HP0 2047 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 FESP07332 822 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 GPR17Q13304 367 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 RAB31Q13636 194 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 CDCA2Q69YH5 1023 aaPredicted RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 SLC37A3Q8NCC5 494 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ZNF461Q8TAF7 563 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 LSM1O15116 133 aaKnown RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 DNAJB6O75190 326 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 FGL1Q08830 312 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 THAP4Q8WY91 577 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ACTR6Q9GZN1 396 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 TGFB1P01137 390 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 PRLP01236 227 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 RBMXP38159 391 aaKnown RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 PBDC1Q9BVG4 233 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 AGTR1P30556 359 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 RPS13P62277 151 aaKnown RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 TLE3Q04726 772 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ZSWIM9Q86XI8 627 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 TFAP2BQ92481 460 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 TPT1P8Q9HAU6 139 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 HS3ST4Q9Y661 456 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 RHCEP18577 417 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ENTPD1P49961 510 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 EMC10Q5UCC4 262 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 CTU1Q7Z7A3 348 aaKnown RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 PM20D2Q8IYS1 436 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 CD93Q9NPY3 652 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 MAGEA8P43361 318 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ERI1Q8IV48 349 aaKnown RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 IL17RCQ8NAC3 791 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 OR5J2Q8NH18 312 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ZNF285Q96NJ3 590 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 CIB4A0PJX0 185 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 FAM159BA6NKW6 160 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 M0R2N6 131 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 MSX2P35548 267 aaPredicted RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 TMBIM1Q969X1 311 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 TMED9Q9BVK6 235 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 SYT4Q9H2B2 425 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 COQ10BQ9H8M1 238 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ZNF701Q9NV72 531 aaPredicted RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 DLGAP4Q9Y2H0 992 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 B4GALT2O60909 372 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 VNN2O95498 520 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 MT-CO2P00403 227 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 C7P10643 843 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ETS2P15036 469 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 CHRNB4P30926 498 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ASPGQ86U10 573 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 TFGQ92734 400 aaPredicted RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 P2RY13Q9BPV8 354 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 MMP27Q9H306 513 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ZNF175Q9Y473 711 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 SOD2P04179 222 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 ATF4P18848 351 aaPredicted RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 TNFSF4P23510 183 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 TIFABQ6ZNK6 161 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 KBTBD6Q86V97 674 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 TLCD1Q96CP7 247 aa9.33□□□□□ -0.92
CUX1-203ENST00000360264 CADM1Q9BY67 442 aaKnown RBP9.33□□□□□ -0.92
CUX1-203ENST00000360264 DUOX1Q9NRD9 1551 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 A0A1W2PPL8 197 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 M0QX08 132 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 NIPSNAP2O75323 286 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ACTC1P68032 377 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ACTA1P68133 377 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 HMGCS1Q01581 520 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ZNF283Q8N7M2 679 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 HERPUD2Q9BSE4 406 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 WDR45Q9Y484 360 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 LOC100130705A0A1B0GUX0 176 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 A6NCN8 305 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 COL28A1Q2UY09 1125 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 BCL2L15Q5TBC7 163 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 OR13C3Q8NGS6 347 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ERVK-18Q9QC07 812 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 RNF215Q9Y6U7 377 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 SLC51AQ86UW1 340 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ZNF420Q8TAQ5 688 aaPredicted RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 ASB15Q8WXK1 588 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 GLYATL1Q969I3 302 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 CERS4Q9HA82 394 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ICKQ9UPZ9 632 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 CYB5BO43169 146 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 SPARCP09486 303 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 PBX1P40424 430 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 TMEM115Q12893 351 aaPredicted RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 PRRT3Q5FWE3 981 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 COQ8AQ8NI60 647 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 PHOSPHO1Q8TCT1 267 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ALPK1Q96QP1 1244 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 POLR2AP24928 1970 aaKnown RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 SLIT2O94813 1529 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 LEFTY2O00292 366 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 KLF11O14901 512 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 MMP20O60882 483 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms