RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PCBP2Q15366 365 aaKnown RBP eCLIP6.33□□□□□ -1.43e-7■■■■□ 25.6
VPS13B-202ENST00000357162 FAM214AQ32MH5 1076 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 UBXN11Q5T124 520 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 RAET1GQ6H3X3 334 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 TRMT10BQ6PF06 316 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 PXKQ7Z7A4 578 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GALNT5Q7Z7M9 940 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GTPBP8Q8N3Z3 284 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GPR151Q8TDV0 419 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 USP9YO00507 2555 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF208O43345 1280 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 UBL4AP11441 157 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 IL7RP16871 459 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 PTPN2P17706 415 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 TAGLN2P37802 199 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 DGKQP52824 942 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SLC6A19Q695T7 634 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF467Q7Z7K2 595 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 AMIGO1Q86WK6 493 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF419Q96HQ0 510 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 PSD2Q9BQI7 771 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 PRODH2Q9UF12 536 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SULT1C4O75897 302 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 EOMESO95936 686 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 TIPARPQ7Z3E1 657 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 POC1BQ8TC44 478 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 APMAPQ9HDC9 416 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 FAM212BQ9NTI7 297 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SALL4Q9UJQ4 1053 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SLC16A6O15403 523 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 LALBAP00709 142 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 KCNE1P15382 129 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 PCK2Q16822 640 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 FAM122BQ7Z309 247 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ANKRD53Q8N9V6 530 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 MYOCQ99972 504 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 NKIRAS2Q9NYR9 191 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 KLHL13Q9P2N7 655 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 POLLQ9UGP5 575 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 RBMX2Q9Y388 322 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 PCYT1BQ9Y5K3 369 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SLC22A7Q9Y694 548 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ANKRD33BA6NCL7 494 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 BCAS1O75363 584 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 MTNR1AP48039 350 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GPR143P51810 404 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 INTS5Q6P9B9 1019 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 OSMRQ99650 979 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 C11orf49Q9H6J7 331 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 AIG1Q9NVV5 245 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM181Q9P2C4 612 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 TO15178 435 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 OIP5O43482 229 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ECI2O75521 394 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ARF5P84085 180 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 CCDC54Q8NEL0 328 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SLC25A21Q9BQT8 299 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SLAMF7Q9NQ25 335 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 NOP16Q9Y3C1 178 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 MTCL1Q9Y4B5 1905 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 A8MVJ9 347 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 LYRM1O43325 122 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GMDSO60547 372 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GOT2P00505 430 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 BMXP51813 675 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 RHBDL3P58872 404 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 TAS2R50P59544 299 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF704Q6ZNC4 412 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 MARCH9Q86YJ5 346 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GPR135Q8IZ08 494 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 FAM86B1Q8N7N1 296 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 C1orf127Q8N9H9 656 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ACTRT3Q9BYD9 372 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 LAMB1P07942 1786 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 PCP4L1A6NKN8 68 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 AMHP03971 560 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 KCNA5P22460 613 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 CLCN7P51798 805 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 WNT4P56705 351 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 TAS2R46P59540 309 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 CRADDP78560 199 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 RAB31Q13636 194 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 AKR1C8PQ5T2L2 129 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 CLEC6AQ6EIG7 209 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 THOC6Q86W42 341 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 COMMD1Q8N668 190 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 PROKR2Q8NFJ6 384 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 OR13F1Q8NGS4 319 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 TSSK6Q9BXA6 273 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ZDHHC3Q9NYG2 299 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 CFAP97Q9P2B7 532 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 RNF13O43567 381 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 UBL3O95164 117 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 HTR3BO95264 441 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF823P16415 610 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 OXA1LQ15070 435 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 CAMKVQ8NCB2 501 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 MTMR14Q8NCE2 650 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GPR150Q8NGU9 434 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms