RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RNF6Q9Y252 685 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 LTBP3Q9NS15 1303 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 OR6C70A6NIJ9 312 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 VEGFDO43915 354 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 RFPL1O75677 317 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 NPPAP01160 153 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 ENTPD1P49961 510 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 RAB39AQ14964 217 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 NCEH1Q6PIU2 408 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 KBTBD6Q86V97 674 aa12.7□□□□□ -0.38
SCN8A-202ENST00000355133 CPNE2Q96FN4 548 aaPredicted RBP12.7□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
SCN8A-202ENST00000355133 NOP16Q9Y3C1 178 aaKnown RBP12.7□□□□□ -0.38
SCN8A-202ENST00000355133 PARP4Q9UKK3 1724 aaKnown RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 A6NCN8 305 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 SLC16A5O15375 505 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 DUX1O43812 170 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 APOL3O95236 402 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 SRCP12931 536 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 GLP1RP43220 463 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 OR4D2P58180 307 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 EIF5AP63241 154 aaKnown RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 PLP2Q04941 152 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 SEC23BQ15437 767 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 NKAPLQ5M9Q1 402 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 WDTC1Q8N5D0 677 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 TMEM234Q8WY98 164 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 HSPA12BQ96MM6 686 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 HPF1Q9NWY4 346 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 PPP4R1LQ9P1A2 415 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 SLC33A1O00400 549 aaPredicted RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 MAPK3P27361 379 aaPredicted RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 TIA1P31483 386 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 ATP4BP51164 291 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 CDKN2DP55273 166 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 PON2Q15165 354 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 NIPAL1Q6NVV3 410 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 GALNT12Q8IXK2 581 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 CSNK1A1LQ8N752 337 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 S100A16Q96FQ6 103 aaKnown RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 LRIG1Q96JA1 1093 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 MARCH4Q9P2E8 410 aaPredicted RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 CMAHPQ9Y471 501 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 LAMTOR5O43504 91 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 DFNA5O60443 496 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 FARS2O95363 451 aaKnown RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 S1PR4O95977 384 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 C6P13671 934 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 MECP2P51608 486 aaKnown RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 TECRLQ5HYJ1 363 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 RNF111Q6ZNA4 994 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 ERI1Q8IV48 349 aaKnown RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 OR4C15Q8NGM1 316 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 TPSD1Q9BZJ3 242 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 SARDHQ9UL12 918 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 LRRC42Q9Y546 428 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 OR1A2Q9Y585 309 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 PIK3C2AO00443 1686 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 PVALBP20472 110 aaPredicted RBP12.69□□□□□ -0.38
SCN8A-202ENST00000355133 ABRAXAS2Q15018 415 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 LRIT3Q3SXY7 679 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 OR51A7Q8NH64 312 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 C15orf40Q8WUR7 153 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 BEX2Q9BXY8 128 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF700Q9H0M5 742 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 BEX1Q9HBH7 125 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 GSKIPQ9P0R6 139 aa12.69□□□□□ -0.38
SCN8A-202ENST00000355133 TEX13CA0A0J9YWL9 993 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF487B1APH4 448 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 OR2B3O76000 313 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 BPNT1O95861 308 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 CD72P21854 359 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ADH7P40394 386 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ARF3P61204 181 aaPredicted RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 HERV-K104P61576 105 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 RPS26P62854 115 aaKnown RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ARF1P84077 181 aaKnown RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 GAS6Q14393 721 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ELAVL3Q14576 367 aaKnown RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 SFT2D3Q587I9 215 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 CATSPEREQ5SY80 951 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 OR4N5Q8IXE1 308 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 THAP6Q8TBB0 222 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 TEPSINQ96N21 525 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 SLC5A7Q9GZV3 580 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 MVB12BQ9H7P6 319 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 GLS2Q9UI32 602 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 EXOSC1Q9Y3B2 195 aaKnown RBP12.68□□□□□ -0.38
SCN8A-202ENST00000355133 PCP4L1A6NKN8 68 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 J3QRK9 145 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 EMC8O43402 210 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 TGM5O43548 720 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 ELK4P28324 431 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 MAGEA12P43365 314 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 TAS2R43P59537 309 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 KCNC4Q03721 635 aa12.68□□□□□ -0.38
SCN8A-202ENST00000355133 UBQLNLQ8IYU4 475 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms