RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 AP1S1P61966 158 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 RGS1Q08116 209 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 GPR19Q15760 415 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 ZXDCQ2QGD7 858 aaPredicted RBP8.98□□□□□ -0.97
SMG6-202ENST00000354901 TTLL9Q3SXZ7 439 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 KLHL12Q53G59 568 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 ANGPTL8Q6UXH0 198 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 SLC34A3Q8N130 599 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 TMEM132CQ8N3T6 1108 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 ZNF366Q8N895 744 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 ANKRD53Q8N9V6 530 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 ZNF680Q8NEM1 530 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 OR5K1Q8NHB7 308 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 TPD52L3Q96J77 140 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 FOPNLQ96NB1 174 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 COPS8Q99627 209 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 CLEC4MQ9H2X3 399 aaPredicted RBP8.98□□□□□ -0.97
SMG6-202ENST00000354901 CWH43Q9H720 699 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 BEX1Q9HBH7 125 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 DCAF13Q9NV06 445 aaKnown RBP8.98□□□□□ -0.97
SMG6-202ENST00000354901 BAIAP2Q9UQB8 552 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 SAMHD1Q9Y3Z3 626 aaKnown RBP8.98□□□□□ -0.97
SMG6-202ENST00000354901 NINQ8N4C6 2090 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 OR2AG2A6NM03 316 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 SCELO95171 688 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 PAHP00439 452 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 HIST1H2AGP0C0S8 130 aaPredicted RBP8.98□□□□□ -0.97
SMG6-202ENST00000354901 EBLN1P0CF75 366 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 SDC1P18827 310 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 HIST1H2ADP20671 130 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 MRPL19P49406 292 aaKnown RBP8.98□□□□□ -0.97
SMG6-202ENST00000354901 EPHA5P54756 1037 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 LMAN2Q12907 356 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 CARD16Q5EG05 197 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 LINC00299Q6ZSB3 139 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 CREB3L2Q70SY1 520 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 ZNF551Q7Z340 670 aaPredicted RBP8.98□□□□□ -0.97
SMG6-202ENST00000354901 CMTM8Q8IZV2 173 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 SCAMP4Q969E2 229 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 HIST1H2AHQ96KK5 128 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 PANX1Q96RD7 426 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 HIST1H2AJQ99878 128 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 H2AFJQ9BTM1 129 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 ASPNQ9BXN1 380 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 RAD18Q9NS91 495 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 CFAP97Q9P2B7 532 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 ENOPH1Q9UHY7 261 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 PRAMEF33A0A0G2JMD5 474 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 PIPSLA2A3N6 862 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 ZNF98A6NK75 572 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CLDN24A6NM45 220 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 PRAMEF10O60809 474 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 PDE9AO76083 593 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 AP2A2O94973 939 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 EPORP19235 508 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CD9P21926 228 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 GABRR2P28476 465 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CAPZA2P47755 286 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 VEGFBP49765 207 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 TPMTP51580 245 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 RNASE12Q5GAN4 147 aaKnown RBP8.97□□□□□ -0.97
SMG6-202ENST00000354901 ZBTB37Q5TC79 503 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 LAMTOR1Q6IAA8 161 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CORO6Q6QEF8 472 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CRTC1Q6UUV9 634 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 ZNF600Q6ZNG1 722 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CLECL1Q8IZS7 167 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 LMNTD1Q8N9Z9 388 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 DCAF4L2Q8NA75 395 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 C2orf15Q8WU43 125 aaKnown RBP8.97□□□□□ -0.97
SMG6-202ENST00000354901 LINC00052Q96N35 136 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CCM2Q9BSQ5 444 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 GHITMQ9H3K2 345 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 DUSP21Q9H596 190 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 ANKHQ9HCJ1 492 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 PPIEQ9UNP9 301 aaKnown RBP8.97□□□□□ -0.97
SMG6-202ENST00000354901 OR51B4Q9Y5P0 310 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 PLXNA4Q9HCM2 1894 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 PCDHGA12O60330 932 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 SYPP08247 313 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CKMT1AP12532 417 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 SERPINA4P29622 427 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 SOX3P41225 446 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 GBX1Q14549 363 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 MAD2L1BPQ15013 274 aaPredicted RBP8.97□□□□□ -0.97
SMG6-202ENST00000354901 ADNP2Q6IQ32 1131 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 FAM92BQ6ZTR7 304 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 VN1R5Q7Z5H4 357 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 TMEM150AQ86TG1 271 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 SYT12Q8IV01 421 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 TMEM151BQ8IW70 566 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 AADATQ8N5Z0 425 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 KIAA1958Q8N8K9 716 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 OR10Z1Q8NGY1 313 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 ALG14Q96F25 216 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 PYURFQ96I23 114 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 OR5M11Q96RB7 305 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 SLC32A1Q9H598 525 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 SERHLQ9NQF3 203 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 TMEFF2Q9UIK5 374 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms