RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 CCDC115Q96NT0 180 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 VRK1Q99986 396 aaPredicted RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 ZNF251Q9BRH9 671 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 RNF103-CHMP3A0A140T963 221 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 ATP6AP2A0A1C7CYW4 349 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 A0A1W2PPL8 197 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 NDUFS8O00217 210 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 WRBO00258 174 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 STX16O14662 325 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 ATP6AP2O75787 350 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 TSPAN12O95859 305 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 MBP02144 154 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 RRASP10301 218 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 PRKAR1AP10644 381 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 ACVR2AP27037 513 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 CDC34P49427 236 aaPredicted RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 GP2P55259 537 aaKnown RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 LCP2Q13094 533 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 PTPRRQ15256 657 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 GRK1Q15835 563 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 KIF19Q2TAC6 998 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 TBPL2Q6SJ96 375 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 RNF165Q6ZSG1 346 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 GPR149Q86SP6 731 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 DDX53Q86TM3 631 aaKnown RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 MIB1Q86YT6 1006 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 DMRTC2Q8IXT2 367 aaPredicted RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 CLEC4FQ8N1N0 589 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 PARP16Q8N5Y8 322 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 PNPLA1Q8N8W4 532 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 NSUN5Q96P11 429 aaKnown RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 AARSD1Q9BTE6 412 aaKnown RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 GPR63Q9BZJ6 419 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 ALG2Q9H553 416 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 ELOVL6Q9H5J4 265 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 KRT84Q9NSB2 600 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 TDP1Q9NUW8 608 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 ACTR10Q9NZ32 417 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 HCN2Q9UL51 889 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 TP53BP1Q12888 1972 aaPredicted RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 DENND4CQ5VZ89 1909 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 DRGXA6NNA5 263 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 EI24O14681 340 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 ANKRD28O15084 1053 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 IGLV3-27P01718 113 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 LCKP06239 509 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 HAPLN1P10915 354 aaPredicted RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 NCF1P14598 390 aaPredicted RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 SLC2A4P14672 509 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 LBPP18428 481 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 LAG3P18627 525 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 CHMP24386 653 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 RIDAP52758 137 aaKnown RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 HK3P52790 923 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 STC1P52823 247 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 PER3P56645 1201 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 SLC10A7Q0GE19 358 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 KIAA0040Q15053 153 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 PAGE3Q5JUK9 113 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 DLEU7Q6UYE1 221 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 CYP4Z2PQ8N1L4 340 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 FAR1Q8WVX9 515 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 PINK1Q9BXM7 581 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 MS4A7Q9GZW8 240 aaPredicted RBP10.38□□□□□ -0.75
SND1-201ENST00000354725 NUAK2Q9H093 628 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 ZBP1Q9H171 429 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 ATXN3LQ9H3M9 355 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 OPTCQ9UBM4 332 aa10.38□□□□□ -0.75
SND1-201ENST00000354725 NOTCH4Q99466 2003 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 LRRC14BA6NHZ5 514 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 NR5A2O00482 541 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 SUPT7LO94864 414 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 CNOT4O95628 575 aaKnown RBP10.37□□□□□ -0.75
SND1-201ENST00000354725 HPRP00739 348 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 FTH1P02794 183 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 FHP07954 510 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 RHOQP17081 205 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 GJA1P17302 382 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 PBX3P40426 434 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 GSTM5P46439 218 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 RPS26P62854 115 aaKnown RBP10.37□□□□□ -0.75
SND1-201ENST00000354725 PAN2Q504Q3 1202 aaKnown RBP10.37□□□□□ -0.75
SND1-201ENST00000354725 TIGD3Q6B0B8 471 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 FUT10Q6P4F1 479 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 TEX261Q6UWH6 196 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 NAT16Q8N8M0 369 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 SETD7Q8WTS6 366 aaKnown RBP10.37□□□□□ -0.75
SND1-201ENST00000354725 LINC00052Q96N35 136 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 KCNA7Q96RP8 456 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 MMP27Q9H306 513 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 SUV39H2Q9H5I1 410 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 HEBP1Q9NRV9 189 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 CATSPERZQ9NTU4 200 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 TIMM13Q9Y5L4 95 aaPredicted RBP10.37□□□□□ -0.75
SND1-201ENST00000354725 IRAK3Q9Y616 596 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 U3KQ87 197 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 J3KR12 359 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 ARNTLO00327 626 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 APOL3O95236 402 aa10.37□□□□□ -0.75
SND1-201ENST00000354725 SIX3O95343 332 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms