RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 TMEM138Q9NPI0 162 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 STUB1Q9UNE7 303 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 SMIM30A4D0T7 59 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 TPD52L2O43399 206 aaKnown RBP14.14□□□□□ -0.15
NUP50-201ENST00000347635 OR10H2O60403 315 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 OXSR1O95747 527 aaPredicted RBP14.14□□□□□ -0.15
NUP50-201ENST00000347635 CSF2P04141 144 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 CLK3P49761 638 aaKnown RBP14.14□□□□□ -0.15
NUP50-201ENST00000347635 PSMD4P55036 377 aaKnown RBP14.14□□□□□ -0.15
NUP50-201ENST00000347635 VEZF1Q14119 521 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 MRPL43Q8N983 215 aaKnown RBP14.14□□□□□ -0.15
NUP50-201ENST00000347635 TTLL2Q9BWV7 592 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 SLC2A4RGQ9NR83 387 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 FAM170BA6NMN3 283 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 CAPZA2P47755 286 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 PITPNAQ00169 270 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 GSTM4Q03013 218 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 MAB21L1Q13394 359 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 SLC9A5Q14940 896 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 INAVAQ3KP66 663 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 ASB18Q6ZVZ8 466 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 OR8H3Q8N146 312 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 SMIM14Q96QK8 99 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 TMEM27Q9HBJ8 222 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 GPN1Q9HCN4 374 aaPredicted RBP14.14□□□□□ -0.15
NUP50-201ENST00000347635 EXOSC1Q9Y3B2 195 aaKnown RBP14.14□□□□□ -0.15
NUP50-201ENST00000347635 CDK5RAP2Q96SN8 1893 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 RHPN2P1A8MT19 583 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 EIF3FO00303 357 aaPredicted RBP14.14□□□□□ -0.15
NUP50-201ENST00000347635 OR7A17O14581 309 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 MUSKO15146 869 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 LILRB3O75022 631 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 IFI30P13284 250 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 DHCR24Q15392 516 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 SPHARQ15513 63 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 MICAQ29983 383 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 CDKL4Q5MAI5 379 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 DESI1Q6ICB0 168 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 Q6ZSR9 355 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 IQCHQ86VS3 1027 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 KATNBL1Q9H079 304 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 IL26Q9NPH9 171 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 A0A0G2JN53 185 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 FAM92AA1XBS5 289 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 IFNA16P05015 189 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 ETFAP13804 333 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 RGRP47804 291 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 HNRNPFP52597 415 aaKnown RBP14.13□□□□□ -0.15
NUP50-201ENST00000347635 ABATP80404 500 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 TAC3Q9UHF0 121 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 CDH7Q9ULB5 785 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 DCDC1P59894 354 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 MPP7Q5T2T1 576 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 OR9A1PQ8NGU1 263 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 DNASE1L2Q92874 299 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 SMG9Q9H0W8 520 aaKnown RBP14.13□□□□□ -0.15
NUP50-201ENST00000347635 TNFRSF10DQ9UBN6 386 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 CLDN24A6NM45 220 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 TSPAN6O43657 245 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 TNFP01375 233 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 HMGN1P05114 100 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 GGT2P36268 569 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 STXBP1P61764 594 aaKnown RBP14.13□□□□□ -0.15
NUP50-201ENST00000347635 MEF2AQ02078 507 aaPredicted RBP14.13□□□□□ -0.15
NUP50-201ENST00000347635 SAMD14Q8IZD0 417 aaPredicted RBP14.13□□□□□ -0.15
NUP50-201ENST00000347635 RAB8BQ92930 207 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 TBX5Q99593 518 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 ATAD5Q96QE3 1844 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 CAPN5O15484 640 aaPredicted RBP14.13□□□□□ -0.15
NUP50-201ENST00000347635 ENTPD6O75354 484 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 CDH11P55287 796 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 UGT3A2Q3SY77 523 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 SUSD1Q6UWL2 747 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 ERN2Q76MJ5 926 aaKnown RBP14.13□□□□□ -0.15
NUP50-201ENST00000347635 TSPAN33Q86UF1 283 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 TESCQ96BS2 214 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 TMEM246Q9BRR3 403 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 ZNF224Q9NZL3 707 aa14.13□□□□□ -0.15
NUP50-201ENST00000347635 GPR39O43194 453 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 TNFRSF1BP20333 461 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 GUCA1AP43080 201 aaPredicted RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 SELENOWP63302 87 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 RUNX3Q13761 415 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 ELAVL3Q14576 367 aaKnown RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 Q6ZVL8 140 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 CPXM2Q8N436 756 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 SLC37A3Q8NCC5 494 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 OR8J1Q8NGP2 316 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 RHOXF1Q8NHV9 184 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 HUS1BQ8NHY5 278 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 SCAMP4Q969E2 229 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 ZNF486Q96H40 463 aaPredicted RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 CPPED1Q9BRF8 314 aaPredicted RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 TTYH2Q9BSA4 534 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 KIAA0355O15063 1070 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 KMOO15229 486 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 OR6A2O95222 327 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 CPNE6O95741 557 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 FUCA1P04066 466 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 IL3P08700 152 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms