RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 WRBO00258 174 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 ITGBL1O95965 494 aaPredicted RBP10.45□□□□□ -0.74
CLCN6-202ENST00000346436 PGRP06401 933 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF28P17035 718 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 VBP1P61758 197 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 CD47Q08722 323 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 SMCO1Q147U7 214 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 RANBP10Q6VN20 620 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 CCDC80Q76M96 950 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 GALNT10Q86SR1 603 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 GPR65Q8IYL9 337 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 LILRA2Q8N149 483 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 SVOPLQ8N434 492 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 PACRGLQ8N7B6 248 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 TOR1AIP2Q8NFQ8 470 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 OR4K14Q8NGD5 310 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 OR5AK3PQ8NH89 298 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 P2RX2Q9UBL9 471 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 UTS2RQ9UKP6 389 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 TTC34A8MYJ7 566 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 GPR39O43194 453 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 B4GAT1O43505 415 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 STC2O76061 302 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 EPOP01588 193 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 ENGP17813 658 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 GJA5P36382 358 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 MAGEA3P43357 314 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 NOVA1P51513 510 aaKnown RBP10.45□□□□□ -0.74
CLCN6-202ENST00000346436 CRTC1Q6UUV9 634 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 NRROSQ86YC3 692 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 TMEFF1Q8IYR6 380 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 KBTBD8Q8NFY9 601 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 GSTO2Q9H4Y5 243 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 CTPS2Q9NRF8 586 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 A0A1W2PQ72 361 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 A0A1W2PRG6 482 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 ARHGEF33A8MVX0 844 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 LOC110117498-PIK3R3F6TDL0 507 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 BDKRB1P46663 353 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 HTR6P50406 440 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 ALDH3A2P51648 485 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 SRP54P61011 504 aaKnown RBP10.45□□□□□ -0.74
CLCN6-202ENST00000346436 PMS2P3Q13401 168 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 TAB1Q15750 504 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 DEFB133Q30KQ1 61 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 PAGE3Q5JUK9 113 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 PM20D1Q6GTS8 502 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 TMCO2Q7Z6W1 182 aaPredicted RBP10.45□□□□□ -0.74
CLCN6-202ENST00000346436 TRIM74Q86UV6 250 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 TRIM73Q86UV7 250 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 FTMTQ8N4E7 242 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 ABCB9Q9NP78 766 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 SLC35C2Q9NQQ7 365 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 VPS29Q9UBQ0 182 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 PCDHGA6Q9Y5G7 932 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 SHANK3Q9BYB0 1731 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 CNR2P34972 360 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 EPHA4P54764 986 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 EMP2P54851 167 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 RAB14P61106 215 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 ABRAXAS2Q15018 415 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 MLC1Q15049 377 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM236Q5W0B7 351 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM225Q6GV28 225 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 THOC6Q86W42 341 aaKnown RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 MDGA1Q8NFP4 955 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 ZUFSPQ96AP4 578 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 CNDP2Q96KP4 475 aaKnown RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 SEC61A2Q9H9S3 476 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 MAGEE1Q9HCI5 957 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 POLE4Q9NR33 117 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 NLE1Q9NVX2 485 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 GPR89AB7ZAQ6 455 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 GPR89BP0CG08 455 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 CD36P16671 472 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 MAP2K4P45985 399 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 PCDH1Q08174 1060 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 DENND5AQ6IQ26 1287 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 PGM2L1Q6PCE3 622 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 NR4A3Q92570 626 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 DUSP26Q9BV47 211 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 PCDHGB2Q9Y5G2 931 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 SH3PXD2BA1X283 911 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 C2orf78A6NCI8 922 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 CREG1O75629 220 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 PAPSS2O95340 614 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 TNFSF4P23510 183 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 RAB8AP61006 207 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 GFOD2Q3B7J2 385 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 GPR149Q86SP6 731 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 UXS1Q8NBZ7 420 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 OR14L1PQ8NHC6 308 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 C1orf216Q8TAB5 229 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 FRMD6Q96NE9 622 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 RANBP9Q96S59 729 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 COPS4Q9BT78 406 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 CLEC4MQ9H2X3 399 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 FARSBQ9NSD9 589 aaKnown RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 MRPL39Q9NYK5 338 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms