RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 ARAFP10398 606 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 DRD2P14416 443 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 HIST1H1TP22492 207 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 DNAJA1P31689 397 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SH3BGRP55822 239 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ITGA1P56199 1179 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 RPS26P62854 115 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SLC9A5Q14940 896 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TOR1AIP1Q5JTV8 583 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SAXO2Q658L1 398 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 RBM44Q6ZP01 1051 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ABI3BPQ7Z7G0 1075 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SLC22A18ASQ8N1D0 253 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ACOT4Q8N9L9 421 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 MFSD9Q8NBP5 474 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ZNF555Q8NEP9 628 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 OR2L5Q8NG80 312 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SPPL2AQ8TCT8 520 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TAMM41Q96BW9 452 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 DGCR14Q96DF8 476 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 NEURL3Q96EH8 262 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TOE1Q96GM8 510 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 PHF7Q9BWX1 381 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SIRT3Q9NTG7 399 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 PADI2Q9Y2J8 665 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SAMHD1Q9Y3Z3 626 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 A0A087WXM4 84 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 WASHC1A8K0Z3 465 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 FPR1P21462 350 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 RABIFP47224 123 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 CDK9P50750 372 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 DGKEP52429 567 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 DSTNP60981 165 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ILF3Q12906 894 aaKnown RBP eCLIP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SLAMF1Q13291 335 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 PRRT3Q5FWE3 981 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TJAP1Q5JTD0 557 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 CEACAM20Q6UY09 585 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 CCDC80Q76M96 950 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 CYP4Z1Q86W10 505 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 PAQR7Q86WK9 346 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 C8orf59Q8N0T1 100 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 FRMD1Q8N878 549 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ZFP28Q8NHY6 868 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ZFAND2BQ8WV99 257 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 SLC22A18Q96BI1 424 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 FAIM2Q9BWQ8 316 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 GABARAPL1Q9H0R8 117 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ING2Q9H160 280 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 REEP1Q9H902 201 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ACSS1Q9NUB1 689 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 TUBA8Q9NY65 449 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 EHD3Q9NZN3 535 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 THEGQ9P2T0 379 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 ORC6Q9Y5N6 252 aa13.4□□□□□ -0.26
CDK5RAP1-202ENST00000346416 LRP4O75096 1905 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GLOD5A6NK44 160 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ZW10O43264 779 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PRKRAO75569 313 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 BMP10O95393 424 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 IGLV3-19P01714 112 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SRFP11831 508 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 IGFBP5P24593 272 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ATP5A1P25705 553 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ELK4P28324 431 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GSTT1P30711 240 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RAD23AP54725 363 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PCBP3P57721 371 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RAB8AP61006 207 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ROR2Q01974 943 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ELOAQ14241 798 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RFX4Q33E94 735 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SPDYE7PQ495Y7 208 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TNFAIP8L2Q6P589 184 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 THAP5Q7Z6K1 395 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 HORMAD2Q8N7B1 307 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 LZICQ8WZA0 190 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 FCRL4Q96PJ5 515 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RBM38Q9H0Z9 239 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RUBCNLQ9H714 662 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 C2orf42Q9NWW7 574 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PDP1Q9P0J1 537 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 APOBEC3BQ9UH17 382 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ATG4BQ9Y4P1 393 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ASB4Q9Y574 426 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 LOC100130705A0A1B0GUX0 176 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TRIM64CA6NLI5 447 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 MAN2B1O00754 1011 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TOR1BO14657 336 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 VILLO15195 856 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 B4GALT2O60909 372 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 MITFO75030 526 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TNFRSF1BP20333 461 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 POLR2IP36954 125 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 YAP1P46937 504 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ALDH3B2P48448 385 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 DAPP51397 102 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CCR5P51681 352 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ARFIP1P53367 373 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GPR18Q14330 331 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms