RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 STUB1Q9UNE7 303 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 A0A0G2JLW4 131 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 INSIG1O15503 277 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 CXCL14O95715 111 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 COQ5Q5HYK3 327 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 CNTN3Q9P232 1028 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 IGSF9Q9P2J2 1179 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 ZDHHC9Q9Y397 364 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 GGT3PA6NGU5 568 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 INMT-MINDY4F8WBC2 141 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 RHCEP18577 417 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 ARL13AQ5H913 290 aaPredicted RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 NAA40Q86UY6 237 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 PHF13Q86YI8 300 aaPredicted RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 IL26Q9NPH9 171 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 HEBP1Q9NRV9 189 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 IQCF5A8MTL0 148 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 SOX1O00570 391 aaPredicted RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 OR7A17O14581 309 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 CORO1AP31146 461 aaKnown RBP17.03■□□□□ 0.32
SMAD4-201ENST00000342988 FAM111BQ6SJ93 734 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 HS3ST5Q8IZT8 346 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 FBXO22Q8NEZ5 403 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 OR5M3Q8NGP4 307 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 THAP4Q8WY91 577 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 LRRC7Q96NW7 1537 aa17.03■□□□□ 0.32
SMAD4-201ENST00000342988 CLIC1O00299 241 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 ZNF662Q6ZS27 426 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 CFAP52Q8N1V2 620 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 ADAP2Q9NPF8 381 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 ERVK13-1Q9NX77 482 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.32
SMAD4-201ENST00000342988 CRB1P82279 1406 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 ZNF207O43670 478 aaKnown RBP17.02■□□□□ 0.32
SMAD4-201ENST00000342988 MT-CYBP00156 380 aaPredicted RBP17.02■□□□□ 0.32
SMAD4-201ENST00000342988 MAP2K5Q13163 448 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 OR2T33Q8NG76 320 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 CHAC2Q8WUX2 184 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 MRI1Q9BV20 369 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 TRMT61BQ9BVS5 477 aaKnown RBP17.02■□□□□ 0.32
SMAD4-201ENST00000342988 RNF212BA8MTL3 300 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 MC2RQ01718 297 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 RNASE10Q5GAN6 216 aaKnown RBP17.02■□□□□ 0.32
SMAD4-201ENST00000342988 TLDC1Q6P9B6 456 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 FUCA2Q9BTY2 467 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 C1orf21Q9H246 121 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 RXFP3Q9NSD7 469 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 MS4A12Q9NXJ0 267 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 H7C1Q1 480 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 ARVCFO00192 962 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 GABRR2P28476 465 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 MRPS10P82664 201 aaKnown RBP17.02■□□□□ 0.32
SMAD4-201ENST00000342988 SF3B4Q15427 424 aaKnown RBP eCLIP17.02■□□□□ 0.321e-6■■■■■ 39.8
SMAD4-201ENST00000342988 OR1S1Q8NH92 325 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 PPP1R35Q8TAP8 253 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 CDK15Q96Q40 435 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 NUP153P49790 1475 aaKnown RBP17.02■□□□□ 0.32
SMAD4-201ENST00000342988 GPR75-ASB3A0A0A6YYF3 556 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 A0A1B0GV50 99 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 A0A1W2PPV4 95 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 DFNA5O60443 496 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 PITPNBP48739 271 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 RTP1P59025 263 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 PPATQ06203 517 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 NXPE4Q6UWF7 544 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 METTL4Q8N3J2 472 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 PGAM5Q96HS1 289 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 CENPOQ9BU64 300 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 C2orf42Q9NWW7 574 aa17.02■□□□□ 0.32
SMAD4-201ENST00000342988 TOP6BLQ8N6T0 577 aa17.02■□□□□ 0.31
SMAD4-201ENST00000342988 ITGB5P18084 799 aa17.02■□□□□ 0.31
SMAD4-201ENST00000342988 GGT2P36268 569 aa17.02■□□□□ 0.31
SMAD4-201ENST00000342988 NCCRP1Q6ZVX7 275 aaPredicted RBP17.02■□□□□ 0.31
SMAD4-201ENST00000342988 KIAA0895Q8NCT3 520 aa17.02■□□□□ 0.31
SMAD4-201ENST00000342988 ZDHHC1Q8WTX9 485 aa17.02■□□□□ 0.31
SMAD4-201ENST00000342988 GINS3Q9BRX5 216 aa17.02■□□□□ 0.31
SMAD4-201ENST00000342988 ZCCHC3Q9NUD5 404 aaKnown RBP17.02■□□□□ 0.31
SMAD4-201ENST00000342988 MRPL42Q9Y6G3 142 aaKnown RBP17.02■□□□□ 0.31
SMAD4-201ENST00000342988 DOCK8Q8NF50 2099 aa17.02■□□□□ 0.31
SMAD4-201ENST00000342988 F6UZH7 168 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 CSDE1O75534 798 aaKnown RBP17.01■□□□□ 0.31
SMAD4-201ENST00000342988 C2P06681 752 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 TARBP2Q15633 366 aaKnown RBP17.01■□□□□ 0.31
SMAD4-201ENST00000342988 TMEM220Q6QAJ8 160 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 SEMA6DQ8NFY4 1073 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 BPIFA2Q96DR5 249 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 SHDQ96IW2 340 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 PKP4Q99569 1192 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 ERVK-7P63135 1459 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 TLX2O43763 284 aaPredicted RBP17.01■□□□□ 0.31
SMAD4-201ENST00000342988 RFC3P40938 356 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 NUDT6P53370 316 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 MTPNP58546 118 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 TRAM2Q15035 370 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 LURAP1Q96LR2 239 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.01■□□□□ 0.31
SMAD4-201ENST00000342988 ZIM2Q9NZV7 527 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 TIMM22Q9Y584 194 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 K7EQM0 130 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms