RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 CMAHPQ9Y471 501 aa10.18□□□□□ -0.78
CLN8-201ENST00000331222 PTGDR2Q9Y5Y4 395 aa10.18□□□□□ -0.78
CLN8-201ENST00000331222 A0A1B0GVC2 190 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ABOP16442 354 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ITGB8P26012 769 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 PHC1P78364 1004 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 HNRNPA0Q13151 305 aaKnown RBP10.17□□□□□ -0.78
CLN8-201ENST00000331222 MEP1AQ16819 746 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 DEFB134Q4QY38 66 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 C3orf38Q5JPI3 329 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 MEX3DQ86XN8 651 aaKnown RBP10.17□□□□□ -0.78
CLN8-201ENST00000331222 TMEM130Q8N3G9 435 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 OR4K14Q8NGD5 310 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 KAT8Q9H7Z6 458 aaKnown RBP10.17□□□□□ -0.78
CLN8-201ENST00000331222 TRIM36Q9NQ86 728 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 KCMF1Q9P0J7 381 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 AJAP1Q9UKB5 411 aaPredicted RBP10.17□□□□□ -0.78
CLN8-201ENST00000331222 IRAK2O43187 625 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 CD72P21854 359 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 HNF1BP35680 557 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ST3GAL3Q11203 375 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 SHFQ7M4L6 423 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 SLC22A16Q86VW1 577 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 SLC30A8Q8IWU4 369 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ASB15Q8WXK1 588 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 IRF7Q92985 503 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 C16orf58Q96GQ5 468 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 AGXT2Q9BYV1 514 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 TIGARQ9NQ88 270 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 POT1Q9NUX5 634 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 DNAJB9Q9UBS3 223 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 UBR1Q8IWV7 1749 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 H3BML4 177 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 AMY2BP19961 511 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ELK4P28324 431 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 NDUFS1P28331 727 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 POU6F2P78424 691 aaPredicted RBP10.17□□□□□ -0.78
CLN8-201ENST00000331222 COL9A3Q14050 684 aaPredicted RBP10.17□□□□□ -0.78
CLN8-201ENST00000331222 MS4A13Q5J8X5 152 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 IER5LQ5T953 404 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 FAM86B1Q8N7N1 296 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ZFP41Q8N8Y5 198 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 CANT1Q8WVQ1 401 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 BRI3BPQ8WY22 251 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 PEX13Q92968 403 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ROPN1LQ96C74 230 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 FOXN4Q96NZ1 517 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 PSKH2Q96QS6 385 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 LRRC3Q9BY71 257 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 KCNIP3Q9Y2W7 256 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 PCDHGB1Q9Y5G3 927 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 RAD51DO75771 328 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 OR2B3O76000 313 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 HRGP04196 525 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 PLCXD2Q0VAA5 305 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 EEF1A1P5Q5VTE0 462 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 C9orf135Q5VTT2 229 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 TMEM236Q5W0B7 351 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 C22orf39Q6P5X5 142 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ERN2Q76MJ5 926 aaKnown RBP10.17□□□□□ -0.78
CLN8-201ENST00000331222 SLC44A3Q8N4M1 653 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 FCAMRQ8WWV6 532 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 SCAMP4Q969E2 229 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 CPNE2Q96FN4 548 aaPredicted RBP10.17□□□□□ -0.78
CLN8-201ENST00000331222 SSX3Q99909 188 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 SLC22A4Q9H015 551 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ZNF442Q9H7R0 627 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 MINDY3Q9H8M7 445 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 EPHA6Q9UF33 1036 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 POMPQ9Y244 141 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 PEX16Q9Y5Y5 336 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 COCHO43405 550 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 PDYNP01213 254 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ASGR2P07307 311 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 NFE2L1Q14494 772 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 NSDHLQ15738 373 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 FRS2Q8WU20 508 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 SEC14L1Q92503 715 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 ACAD8Q9UKU7 415 aa10.17□□□□□ -0.78
CLN8-201ENST00000331222 HEPACAM2A8MVW5 462 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 H3BQ06 376 aaPredicted RBP10.16□□□□□ -0.78
CLN8-201ENST00000331222 HSPB6O14558 160 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 F10P00742 488 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 ARG2P78540 354 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 RNF111Q6ZNA4 994 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 DPAGT1Q9H3H5 408 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 NSUN3Q9H649 340 aaKnown RBP10.16□□□□□ -0.78
CLN8-201ENST00000331222 PLEKHA3Q9HB20 300 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 PDE7BQ9NP56 450 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 TAS2R10Q9NYW0 307 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 MYH7BA7E2Y1 1941 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 PRLP01236 227 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 PRKCAP17252 672 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 GLDCP23378 1020 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 HOXA10P31260 410 aaPredicted RBP10.16□□□□□ -0.78
CLN8-201ENST00000331222 RHDQ02161 417 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 RFTN1Q14699 578 aaPredicted RBP10.16□□□□□ -0.78
CLN8-201ENST00000331222 SEC23BQ15437 767 aa10.16□□□□□ -0.78
CLN8-201ENST00000331222 C6orf183Q5T699 404 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms