RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CPA2P48052 419 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 DNASE1L1P49184 302 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 EIF3BP55884 814 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 PRDX1Q06830 199 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 MORF4L2Q15014 288 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 ZNF750Q32MQ0 723 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 RNASEH2BQ5TBB1 312 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 ICE2Q659A1 982 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 FAM47EQ6ZV65 393 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 VN1R4Q7Z5H5 301 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 ADCK2Q7Z695 626 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 LUZP2Q86TE4 346 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 SLC26A11Q86WA9 606 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 PDIK1LQ8N165 341 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 LIX1Q8N485 282 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 BBOF1Q8ND07 529 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 B3GNT7Q8NFL0 401 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 ZCCHC10Q8TBK6 192 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 ZNF669Q96BR6 464 aaPredicted RBP13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 TBC1D20Q96BZ9 403 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 PTCHD1Q96NR3 888 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 MACROD1Q9BQ69 325 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 PIGQQ9BRB3 760 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 AARSD1Q9BTE6 412 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 CCDC68Q9H2F9 335 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 SEMA4BQ9NPR2 832 aaPredicted RBP13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 TMEM160Q9NX00 188 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 LPAR3Q9UBY5 353 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 TAC3Q9UHF0 121 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 RUVBL2Q9Y230 463 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 ZNF860A6NHJ4 632 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 A8MUA0 341 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 TMCC2O75069 709 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 CCNDBP1O95273 360 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 ESR1P03372 595 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 ERGP11308 486 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 PGAM1P18669 254 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 JAK1P23458 1154 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 CCNFP41002 786 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 SOX3P41225 446 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 MC3RP41968 323 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 TSTA3Q13630 321 aaPredicted RBP13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 XKR6Q5GH73 641 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 NSUN5P2Q63ZY6 315 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 RTL4Q6ZR62 310 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 LDB1Q86U70 411 aaPredicted RBP13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 OR5T3Q8NGG3 340 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 NEIL3Q8TAT5 605 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 SKA2Q8WVK7 121 aaPredicted RBP13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 SMPDL3AQ92484 453 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 CCDC138Q96M89 665 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 FOPNLQ96NB1 174 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 FAM167BQ9BTA0 163 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 SLC6A15Q9H2J7 730 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 C20orf96Q9NUD7 363 aaPredicted RBP13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 INTS10Q9NVR2 710 aaKnown RBP13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 ZNF226Q9NYT6 803 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 MARCH4Q9P2E8 410 aaPredicted RBP13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 ZNF223Q9UK11 482 aaPredicted RBP13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 NAALAD2Q9Y3Q0 740 aa13.58□□□□□ -0.24
CTHRC1-201ENST00000330295 TCRBV16S1A1N1A0A5B0 115 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 MBD3L3A6NE82 208 aaPredicted RBP13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 SERINC4A6NH21 518 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 IQCF5A8MTL0 148 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 E5RI56 91 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 B4GALT2O60909 372 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 CHRM3P20309 590 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 CRYGSP22914 178 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 AOAHP28039 575 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 ARL4CP56559 192 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 HYAL2Q12891 473 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 SEMA3AQ14563 771 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 ETFDHQ16134 617 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 TTLL9Q3SXZ7 439 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 C12orf54Q6X4T0 127 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 SYT10Q6XYQ8 523 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 ZNF441Q8N8Z8 693 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 MBD3L2Q8NHZ7 208 aaPredicted RBP13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 MAGEC3Q8TD91 643 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 SNF8Q96H20 258 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 KRT12Q99456 494 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 ZNF703Q9H7S9 590 aaPredicted RBP13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 SACM1LQ9NTJ5 587 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 ZNF281Q9Y2X9 895 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 TENM1Q9UKZ4 2725 aa13.57□□□□□ -0.24
CTHRC1-201ENST00000330295 FAM187AA6NFU0 413 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 CD8B2A6NJW9 211 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 EFCAB8A8MWE9 144 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 GOLGA8KD6RF30 607 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 GOLGA8TH3BQL2 631 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 PRKNO60260 465 aaPredicted RBP13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 PGRP06401 933 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 FREM3P0C091 2139 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 ARNTP27540 789 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 FMO4P31512 558 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 MAGEA3P43357 314 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 BTG2P78543 158 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 CKAP4Q07065 602 aaKnown RBP13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 CALCOCO2Q13137 446 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms