RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 S100A3P33764 101 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 CDKN2CP42773 168 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 TSFMP43897 325 aaKnown RBP14.43□□□□□ -0.1
PRPF3-201ENST00000324862 MXRA7P84157 204 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 DUSP2Q05923 314 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 CLPPQ16740 277 aaPredicted RBP14.43□□□□□ -0.1
PRPF3-201ENST00000324862 CPTPQ5TA50 214 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 CDCP2Q5VXM1 449 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 TMEM126BQ8IUX1 230 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 PARP9Q8IXQ6 854 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 CLEC4FQ8N1N0 589 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 TTC29Q8NA56 475 aaPredicted RBP14.43□□□□□ -0.1
PRPF3-201ENST00000324862 NDC1Q9BTX1 674 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 LOXL2Q9Y4K0 774 aa14.43□□□□□ -0.1
PRPF3-201ENST00000324862 SCN2AQ99250 2005 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 TEX51A0A1B0GUA7 166 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 MRASO14807 208 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 LDB3O75112 727 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 CCKBRP32239 447 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 KIR3DL1P43629 444 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 ILKQ13418 452 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 PDE7AQ13946 482 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 FAM53BQ14153 422 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 HEPACAMQ14CZ8 416 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 GLRX5Q86SX6 157 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 PPP1R3BQ86XI6 285 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 DOK4Q8TEW6 326 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 PPCDCQ96CD2 204 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 DUSP26Q9BV47 211 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 SERHLQ9NQF3 203 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 POLR1CO15160 346 aaPredicted RBP14.42□□□□□ -0.1
PRPF3-201ENST00000324862 FOXD2O60548 495 aaPredicted RBP14.42□□□□□ -0.1
PRPF3-201ENST00000324862 ERAL1O75616 437 aaKnown RBP14.42□□□□□ -0.1
PRPF3-201ENST00000324862 NSA2O95478 260 aaKnown RBP14.42□□□□□ -0.1
PRPF3-201ENST00000324862 PRDX6P30041 224 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 CPOXP36551 454 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 HPCAL1P37235 193 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 E2F1Q01094 437 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 TRA2AQ13595 282 aaKnown RBP eCLIP14.42□□□□□ -0.18e-6■■■□□ 18.8
PRPF3-201ENST00000324862 NDUFA9Q16795 377 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 C6orf10Q5SRN2 563 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 GLB1L3Q8NCI6 653 aaPredicted RBP14.42□□□□□ -0.1
PRPF3-201ENST00000324862 YIPF2Q9BWQ6 316 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 ATP6V1HQ9UI12 483 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 UTS2RQ9UKP6 389 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 PCDHGA1Q9Y5H4 931 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 PCDHA9Q9Y5H5 950 aa14.42□□□□□ -0.1
PRPF3-201ENST00000324862 CYR61O00622 381 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 IL6P05231 212 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 ABCB1P08183 1280 aaPredicted RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 NOVA1P51513 510 aaKnown RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 ARFIP1P53367 373 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 LIMK1P53667 647 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 MAPK10P53779 464 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 CLNS1AP54105 237 aaKnown RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 TNFRSF17Q02223 184 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 FAM214AQ32MH5 1076 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 LACTB2Q53H82 288 aaPredicted RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 GARNL3Q5VVW2 1013 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 LCN10Q6JVE6 187 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 TLDC1Q6P9B6 456 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 DSELQ8IZU8 1212 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 GTF2H4Q92759 462 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 AURKBQ96GD4 344 aaPredicted RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 CMKLR1Q99788 373 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 SLC7A5P2Q9GIP4 190 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 ACTR5Q9H9F9 607 aaPredicted RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 KNTC1P50748 2209 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 A0A088AWK7 358 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 FXYD1O00168 92 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 CFLARO15519 480 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 SORBS2O94875 1100 aaKnown RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 NR2F6P10588 404 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 ZNF10P21506 573 aaPredicted RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 FEN1P39748 380 aaKnown RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 C21orf58P58505 322 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 MAPRE2Q15555 327 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 MAPKAPK3Q16644 382 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 IKBIPQ70UQ0 350 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 RAB11FIP2Q7L804 512 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 PRSS58Q8IYP2 241 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 OR8J2Q8NGG1 315 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 COQ8BQ96D53 544 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 CLIP3Q96DZ5 547 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 CNRIP1Q96F85 164 aaPredicted RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 CLPTM1LQ96KA5 538 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 TMEM121BQ9BXQ6 578 aaPredicted RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 RPF2Q9H7B2 306 aaKnown RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 SLC22A11Q9NSA0 550 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 TXLNGQ9NUQ3 528 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 GMPR2Q9P2T1 348 aaKnown RBP14.41□□□□□ -0.1
PRPF3-201ENST00000324862 PISDQ9UG56 409 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 CES1P1Q9UKY3 287 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 NEUROG3Q9Y4Z2 214 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 B3GALT1Q9Y5Z6 326 aa14.41□□□□□ -0.1
PRPF3-201ENST00000324862 ZFHX4Q86UP3 3567 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 PRMT3O60678 531 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 B4GALT2O60909 372 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 CPSF4O95639 269 aaKnown RBP14.4□□□□□ -0.1
PRPF3-201ENST00000324862 EFNA3P52797 238 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms