RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SOX30O94993 753 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 PIM1P11309 404 aaPredicted RBP16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 CTHP32929 405 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 DHCR24Q15392 516 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 PNCKQ6P2M8 343 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 OR51G2Q8NGK0 314 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 MUS81Q96NY9 551 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 PCDHA2Q9Y5H9 948 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 CXorf49A8MYA2 514 aaPredicted RBP16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 TLE6Q9H808 572 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 SLIT2O94813 1529 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 A0A1W2PPL8 197 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 GPR139Q6DWJ6 353 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 KCTD18Q6PI47 426 aaPredicted RBP16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 ESAMQ96AP7 390 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 OR14A2Q96R54 314 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 CNN2Q99439 309 aaKnown RBP16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 CD244Q9BZW8 370 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 F8W036 122 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 PCDH17O14917 1159 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 BLOC1S1P78537 153 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 OR9I1Q8NGQ6 314 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 LGALS12Q96DT0 336 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 POLR1CO15160 346 aaPredicted RBP16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 PRKACAP17612 351 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 LRRC73Q5JTD7 316 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 OR4K17Q8NGC6 315 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 DEDD2Q8WXF8 326 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 BORCS7Q96B45 105 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC45A3Q96JT2 553 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 EPHA6Q9UF33 1036 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 KLHL33A6NCF5 533 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 OR6C74A6NCV1 312 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 OR51F1A6NGY5 319 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 IL33O95760 270 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 CHRNA4P43681 627 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 ATG9BQ674R7 924 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 MEAF6Q9HAF1 191 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 FAIMQ9NVQ4 179 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 A0A096LPI6 279 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 NEMP2A6NFY4 417 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 RHCEP18577 417 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 PROZP22891 400 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 DKKL1Q9UK85 242 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 TMEM14AQ9Y6G1 99 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 SOX9P48436 509 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 ARSJQ5FYB0 599 aaPredicted RBP16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 GDPD4Q6W3E5 623 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 OR10Q1Q8NGQ4 319 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 ITPKCQ96DU7 683 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 FUBP3Q96I24 572 aaKnown RBP eCLIP16.25■□□□□ 0.196e-6■■■■□ 23.4
SMCHD1-201ENST00000320876 RPL10LQ96L21 214 aaKnown RBP16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 ABCG5Q9H222 651 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 CPNE5Q9HCH3 593 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 CIB4A0PJX0 185 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC38A8A6NNN8 435 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 SNAP29O95721 258 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 C6orf47O95873 294 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 MRPL3P09001 348 aaKnown RBP16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 RAB4AP20338 218 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 OXTRP30559 389 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 PRSS58Q8IYP2 241 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 MUSKO15146 869 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 PMM2O15305 246 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC31A1O15431 190 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 DNAJB6O75190 326 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 AGXTP21549 392 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 NANOGP8Q6NSW7 305 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 NANOGQ9H9S0 305 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF334Q9HCZ1 680 aaPredicted RBP16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 RXFP3Q9NSD7 469 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 A8MVJ9 347 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 PFKLP17858 780 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 GAD2Q05329 585 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 GRIK5Q16478 980 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 C3P1Q6ZMU1 363 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 THAP4Q8WY91 577 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 NR2E3Q9Y5X4 410 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 RAB4BP61018 213 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 MRPL49Q13405 166 aaKnown RBP16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 FLYWCH1Q4VC44 716 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 NOXRED1Q6NXP6 359 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 ANKRD54Q6NXT1 300 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 PHOSPHO1Q8TCT1 267 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 SIRPGQ9P1W8 387 aa16.25■□□□□ 0.19
SMCHD1-201ENST00000320876 UNC119BA6NIH7 251 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 CSKP41240 450 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC36A3Q495N2 470 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF611Q8N823 705 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 URM1Q9BTM9 101 aaKnown RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 GPN2Q9H9Y4 310 aaPredicted RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 MDFIC2A0A1B0GVS7 189 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 FCER2P06734 321 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 CCL23P55773 120 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 ITPRIPL2Q3MIP1 535 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 NCBP2-AS2Q69YL0 99 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC35B2Q8TB61 432 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 ZDHHC1Q8WTX9 485 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms