RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 NDUFAF4Q9P032 175 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 KIF17Q9P2E2 1029 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 ANKMY1Q9P2S6 941 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 ENOPH1Q9UHY7 261 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 POM121BA6NF01 834 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 OR52A4PA6NMU1 304 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 C5orf58C9J3I9 102 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 TNFRSF11BO00300 401 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 TRMUO75648 421 aaKnown RBP13.24□□□□□ -0.29
VAMP2-201ENST00000316509 ELK4P28324 431 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 BCL6P41182 706 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 PXNP49023 591 aaPredicted RBP13.24□□□□□ -0.29
VAMP2-201ENST00000316509 ALDH9A1P49189 494 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 NUP107P57740 925 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 RPS15AP62244 130 aaKnown RBP13.24□□□□□ -0.29
VAMP2-201ENST00000316509 KCNC4Q03721 635 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 RELAQ04206 551 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 CDK5R2Q13319 367 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 KIR2DS3Q14952 304 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 KIAA1614Q5VZ46 1190 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 ABHD17CQ6PCB6 329 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 CEACAM20Q6UY09 585 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 TTC29Q8NA56 475 aaPredicted RBP13.24□□□□□ -0.29
VAMP2-201ENST00000316509 ATG16L2Q8NAA4 619 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 LCN9Q8WX39 176 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 OR1E3Q8WZA6 343 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 THAP11Q96EK4 314 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 MPP4Q96JB8 637 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 BMFQ96LC9 184 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 DOK1Q99704 481 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 ROGDIQ9GZN7 287 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 ADNPQ9H2P0 1102 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 FZD3Q9NPG1 666 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 PRDM7Q9NQW5 492 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 SEMA3GQ9NS98 782 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 LYARQ9NX58 379 aaKnown RBP13.24□□□□□ -0.29
VAMP2-201ENST00000316509 KLF15Q9UIH9 416 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 CD207Q9UJ71 328 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 NDRG4Q9ULP0 352 aaKnown RBP13.24□□□□□ -0.29
VAMP2-201ENST00000316509 MMP17Q9ULZ9 603 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 TPRKBQ9Y3C4 175 aa13.24□□□□□ -0.29
VAMP2-201ENST00000316509 FAM32AQ9Y421 112 aaKnown RBP13.24□□□□□ -0.29
VAMP2-201ENST00000316509 TICRRQ7Z2Z1 1910 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 C10orf142B7Z368 130 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 LATO43561 262 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 CHRM5P08912 532 aaPredicted RBP13.23□□□□□ -0.29
VAMP2-201ENST00000316509 JUNDP17535 347 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 DCKP27707 260 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 NTSP30990 170 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 NUDT1P36639 197 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 SPDYE7PQ495Y7 208 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 KIAA1324Q6UXG2 1013 aaKnown RBP13.23□□□□□ -0.29
VAMP2-201ENST00000316509 SLC44A3Q8N4M1 653 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 SFXN5Q8TD22 340 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 TEFMQ96QE5 360 aaKnown RBP13.23□□□□□ -0.29
VAMP2-201ENST00000316509 PITX2Q99697 317 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 GABARAPL3Q9BY60 117 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 TIMMDC1Q9NPL8 285 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 SLC35C2Q9NQQ7 365 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 PRDM9Q9NQV7 894 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 SCN3BQ9NY72 215 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 SCHIP1Q9P0W5 487 aaPredicted RBP13.23□□□□□ -0.29
VAMP2-201ENST00000316509 PCDHGB1Q9Y5G3 927 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 PCDHGA4Q9Y5G9 962 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 GMPPBQ9Y5P6 360 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 SNX8Q9Y5X2 465 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 SNX5Q9Y5X3 404 aa13.23□□□□□ -0.29
VAMP2-201ENST00000316509 ARRDC5A6NEK1 342 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 ISM1B1AKI9 464 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 SERPIND1P05546 499 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 TFPTP0C1Z6 253 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 ETS2P15036 469 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 RHCEP18577 417 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 POU3F3P20264 500 aaPredicted RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 HIST1H1TP22492 207 aaPredicted RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 AQP1P29972 269 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 RRM2P31350 389 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 CCT3P49368 545 aaKnown RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 TPMTP51580 245 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 CCR5P51681 352 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 HYAL2Q12891 473 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 PPP1R8Q12972 351 aaKnown RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 GNA13Q14344 377 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 MEP1AQ16819 746 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 NDUFAF5Q5TEU4 345 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 GALNT10Q86SR1 603 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 TMEM145Q8NBT3 493 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 OR4C15Q8NGM1 316 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 OR5AK3PQ8NH89 298 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 NT5CQ8TCD5 201 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 NRTNQ99748 197 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 PIP5K1AQ99755 562 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 ZNF576Q9H609 170 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 SLAMF7Q9NQ25 335 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 SIRT3Q9NTG7 399 aaPredicted RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 EXD2Q9NVH0 621 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 DNAAF2Q9NVR5 837 aaKnown RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 TBC1D29Q9UFV1 150 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 ACSL6Q9UKU0 697 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 NAALAD2Q9Y3Q0 740 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms