RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SLC51AQ86UW1 340 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 MEGF6O75095 1541 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 TRAPPC13A5PLN9 417 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 SLC38A8A6NNN8 435 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 AK1P00568 194 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 AKR1C8PQ5T2L2 129 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 MTFR2Q6P444 385 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 RFWD3Q6PCD5 774 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 GLYATL1Q969I3 302 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 PCDHGC4Q9Y5F7 938 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 DNM1LO00429 736 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 PEX14O75381 377 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 ASPAP45381 313 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF460Q14592 562 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 LIPJQ5W064 366 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 GPR139Q6DWJ6 353 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 THAP4Q8WY91 577 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 RLIMQ9NVW2 624 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 NME7Q9Y5B8 376 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 A0A1W2PPL8 197 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 C2orf72A6NCS6 295 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 PMM2O15305 246 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 ADH5P11766 374 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 VEGFCP49767 419 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF366Q8N895 744 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 JOSD2Q8TAC2 188 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 ADAMTS18Q8TE60 1221 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 HBEGFQ99075 208 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 CARS2Q9HA77 564 aaKnown RBP14.93□□□□□ -0.02
HCFC1-201ENST00000310441 EFCAB7A8K855 629 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 CDKN1CP49918 316 aaPredicted RBP14.93□□□□□ -0.02
HCFC1-201ENST00000310441 SH3D19Q5HYK7 790 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 THOC6Q86W42 341 aaKnown RBP14.93□□□□□ -0.02
HCFC1-201ENST00000310441 SKA3Q8IX90 412 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 TSSK6Q9BXA6 273 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 SLC2A4RGQ9NR83 387 aa14.93□□□□□ -0.02
HCFC1-201ENST00000310441 UBR2Q8IWV8 1755 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 SOBPA7XYQ1 873 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 GJB1P08034 283 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 RHCEP18577 417 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 FNTBP49356 437 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 TAS2R20P59543 309 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 ATP6AP1Q15904 470 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 TRAM1L1Q8N609 369 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 BTF3L4Q96K17 158 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 LAMA4Q16363 1823 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 SLC22A31A6NKX4 558 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF821O75541 412 aaPredicted RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 DLDP09622 509 aaKnown RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 BNIP3Q12983 259 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 C6orf120Q7Z4R8 191 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 PURBQ96QR8 312 aaKnown RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 POLDIP3Q9BY77 421 aaKnown RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 JUNP05412 331 aaKnown RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 VSX2P58304 361 aaPredicted RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 PITRM1Q5JRX3 1037 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 SIRPGQ9P1W8 387 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 FCF1Q9Y324 198 aaKnown RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 SLIT2O94813 1529 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 HOXA10P31260 410 aaPredicted RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 BCL2L15Q5TBC7 163 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 CASTOR1Q8WTX7 329 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 TGFB1I1O43294 461 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 LATO43561 262 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 CANT1Q8WVQ1 401 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 NUP98P52948 1817 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 LILRB5O75023 590 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 PTTG1O95997 202 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 H2BFMP0C1H6 154 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 MAOAP21397 527 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 CAMLGP49069 296 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 ARSHQ5FYA8 562 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 DPY19L3Q6ZPD9 716 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 SCRN2Q96FV2 425 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 WDR45Q9Y484 360 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF850A8MQ14 1090 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 DNASE1P24855 282 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 VIPR1P32241 457 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 SEC13P55735 322 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 CCL23P55773 120 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 PLEKHS1Q5SXH7 462 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF776Q68DI1 518 aaPredicted RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 NANOS1Q8WY41 292 aaKnown RBP14.92□□□□□ -0.02
HCFC1-201ENST00000310441 PIP5K1AQ99755 562 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 OR51I1Q9H343 314 aa14.92□□□□□ -0.02
HCFC1-201ENST00000310441 AIPO00170 330 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 TAS2R39P59534 338 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 FAM156AQ8NDB6 213 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 TGM7Q96PF1 710 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 BIN3Q9NQY0 253 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 PCTPQ9UKL6 214 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 ASB4Q9Y574 426 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 FAM163BP0C2L3 166 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 CHRNB2P17787 502 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 TMEM225Q6GV28 225 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 HDHD5Q9BXW7 423 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 TMEM45AQ9NWC5 275 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 ADM5C9JUS6 153 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 TGFB1P01137 390 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms