RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ACSM2BQ68CK6 577 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 CLEC6AQ6EIG7 209 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 SCIMPQ6UWF3 145 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 COMMD6Q7Z4G1 85 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 KIRREL3Q8IZU9 778 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 METTL4Q8N3J2 472 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 GALNT16Q8N428 558 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 LSM14AQ8ND56 463 aaKnown RBP10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 C7orf57Q8NEG2 295 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 AGR3Q8TD06 166 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 TSLPQ969D9 159 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ATP6V1G3Q96LB4 118 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 LPAR4Q99677 370 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 MAPKAP1Q9BPZ7 522 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 TRIM55Q9BYV6 548 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ACPTQ9BZG2 426 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ZNF700Q9H0M5 742 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 DDX31Q9H8H2 851 aaKnown RBP10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 MLXIPLQ9NP71 852 aa10.34□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 LAMA5O15230 3695 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 A0A1W2PQ72 361 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SERTM1A2A2V5 107 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 OR2W5A6NFC9 320 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TMEM114B3SHH9 223 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SLC28A1O00337 649 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 RGS14O43566 566 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TMPRSS11DO60235 418 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 EEDO75530 441 aaKnown RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 MYO1DO94832 1006 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SEC24DO94855 1032 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SNUPNO95149 360 aaKnown RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 ALPPP05187 535 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 KLK1P06870 262 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 DHRS4L1P0CG22 281 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 GRK2P25098 689 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SERPINB3P29508 390 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 PGDP52209 483 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 HNRNPH2P55795 449 aaKnown RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 BTG2P78543 158 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 HMGCS1Q01581 520 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 BTKQ06187 659 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SERTAD2Q14140 314 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 LY6DQ14210 128 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 PCOLCEQ15113 449 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 EXT1Q16394 746 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 BTBD16Q32M84 506 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 LACTB2Q53H82 288 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SFT2D3Q587I9 215 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 ARL13AQ5H913 290 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 PAPD4Q6PIY7 484 aaKnown RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 CLNKQ7Z7G1 428 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TRIM42Q8IWZ5 723 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 PARP9Q8IXQ6 854 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 DDIASQ8IXT1 998 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 KBTBD2Q8IY47 623 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SHISA5Q8N114 240 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 C1orf52Q8N6N3 182 aaKnown RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SLC39A7Q92504 469 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 ZNF717Q9BY31 904 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 LHPPQ9H008 270 aa10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 RPF2Q9H7B2 306 aaKnown RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 PCDHGA9Q9Y5G4 932 aaKnown RBP10.33□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 KMT2BQ9UMN6 2715 aaPredicted RBP10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 IGHV3-20A0A0C4DH32 117 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 GNG14A0A1W2PPG7 69 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TCRBV16S1A1N1A0A5B0 115 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SAGE2PA6NJ88 616 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 HMGB1P1B2RPK0 211 aaPredicted RBP10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 CYR61O00622 381 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 DYRK3O43781 588 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 PCDH7O60245 1069 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 LDB3O75112 727 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 RSL1D1O76021 490 aaKnown RBP10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 IFNA16P05015 189 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 COX7A2P14406 83 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 BGNP21810 368 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TPP2P29144 1249 aaPredicted RBP10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 HNRNPFP52597 415 aaKnown RBP10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 EFNA3P52797 238 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SLC18A1P54219 525 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 ABCE1P61221 599 aaKnown RBP10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TRA2BP62995 288 aaKnown RBP10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TBL3Q12788 808 aaKnown RBP10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 STX3Q13277 289 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 RAPSNQ13702 412 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 MYBPC3Q14896 1274 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 NR6A1Q15406 480 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TTMPQ5BVD1 217 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 VWA5B1Q5TIE3 1220 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 FAM219BQ5XKK7 198 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 KANK2Q63ZY3 851 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 OR52E8Q6IFG1 317 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 MRM1Q6IN84 353 aaKnown RBP10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 RIPOR1Q6ZS17 1223 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 SCUBE1Q8IWY4 988 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 CLYBLQ8N0X4 340 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TMEM52Q8NDY8 209 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 FDCSPQ8NFU4 85 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TWIST2Q8WVJ9 160 aa10.32□□□□□ -0.76
CSPG4P2Y-201ENST00000306853 TM9SF4Q92544 642 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms