RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ZBED6CLQ96FA7 236 aaPredicted RBP16.6■□□□□ 0.25
KRT28-201ENST00000306658 AURKBQ96GD4 344 aaPredicted RBP16.6■□□□□ 0.25
KRT28-201ENST00000306658 ZNF583Q96ND8 569 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 MAPKAP1Q9BPZ7 522 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 IKZF5Q9H5V7 419 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 PIF1Q9H611 641 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 KAT8Q9H7Z6 458 aaKnown RBP16.6■□□□□ 0.25
KRT28-201ENST00000306658 STARD5Q9NSY2 213 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 ACTR3BQ9P1U1 418 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 SEMA5BQ9P283 1151 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 UTS2RQ9UKP6 389 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 PSME2Q9UL46 239 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 CORO2BQ9UQ03 480 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 ERVK-11Q9UQG0 969 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 PCDHB3Q9Y5E6 796 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 GMEB1Q9Y692 573 aa16.6■□□□□ 0.25
KRT28-201ENST00000306658 LY6G6EA0A0G2JKS1 128 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 H0Y3Z8 333 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 GALR3O60755 368 aaPredicted RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 KRT36O76013 467 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 AIFM1O95831 613 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 TLX1P31314 330 aaPredicted RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 FRKP42685 505 aaPredicted RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 GABRA4P48169 554 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 SKP1P63208 163 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 PRTGQ2VWP7 1150 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 PRSS42Q7Z5A4 293 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 SPATA24Q86W54 205 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 KMT5CQ86Y97 462 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 ENDOVQ8N8Q3 282 aaKnown RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 OR2T12Q8NG77 320 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 FAM120BQ96EK7 910 aaKnown RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 ZNF285Q96NJ3 590 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 TPT1P8Q9HAU6 139 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 ANKHQ9HCJ1 492 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 LYRM4Q9HD34 91 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 SLC35C2Q9NQQ7 365 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 ACSS1Q9NUB1 689 aaPredicted RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 C5AR2Q9P296 337 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 GMPR2Q9P2T1 348 aaKnown RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 EGFL7Q9UHF1 273 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 DAPP1Q9UN19 280 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 MRPS2Q9Y399 296 aaKnown RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 SNX13Q9Y5W8 968 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 U3KQA8 63 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 SPACA6W5XKT8 324 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 KMT2EQ8IZD2 1858 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 TOX3O15405 576 aaPredicted RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 GMNNO75496 209 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 NR2F6P10588 404 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 IL1RNP18510 177 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 CPN2P22792 545 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 CSF2RBP32927 897 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 DUSP3P51452 185 aaPredicted RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 LIM2P55344 173 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 PCBP4P57723 403 aaKnown RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 ABHD18Q0P651 414 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 RUNX2Q13950 521 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 MLC1Q15049 377 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 RCN1Q15293 331 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 SNAP47Q5SQN1 464 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 TMTC4Q5T4D3 741 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 GARNL3Q5VVW2 1013 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 C18orf63Q68DL7 685 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 SLC48A1Q6P1K1 146 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 TMEM71Q6P5X7 295 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 PROSER1Q86XN7 944 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 NPLQ9BXD5 320 aaPredicted RBP16.59■□□□□ 0.25
KRT28-201ENST00000306658 S100A14Q9HCY8 104 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 NEUROD4Q9HD90 331 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 PRDM9Q9NQV7 894 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 GIMAP4Q9NUV9 329 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 IRAK4Q9NWZ3 460 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 KCMF1Q9P0J7 381 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 NAALAD2Q9Y3Q0 740 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 R4GN57 208 aa16.59■□□□□ 0.25
KRT28-201ENST00000306658 GLOD5A6NK44 160 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 PGRMC2O15173 223 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 ZNF883P0CG24 379 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 CKMT1AP12532 417 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 GPX2P18283 190 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 NTSP30990 170 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 SEPHS1P49903 392 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 SNRPNP63162 240 aaKnown RBP16.58■□□□□ 0.24
KRT28-201ENST00000306658 DAB2P98082 770 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 TNFRSF17Q02223 184 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 FXNQ16595 210 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 PERM1Q5SV97 790 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 LCN8Q6JVE9 175 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 ZFP1Q6P2D0 407 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 CYP2R1Q6VVX0 501 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 SERPINA11Q86U17 422 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 ZFP28Q8NHY6 868 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 ZFP90Q8TF47 636 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 RSRC1Q96IZ7 334 aaKnown RBP16.58■□□□□ 0.24
KRT28-201ENST00000306658 BBS4Q96RK4 519 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 SMOC1Q9H4F8 434 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 STX18Q9P2W9 335 aaKnown RBP16.58■□□□□ 0.24
KRT28-201ENST00000306658 MAGEL2Q9UJ55 1249 aa16.58■□□□□ 0.24
KRT28-201ENST00000306658 ELOVL7A1L3X0 281 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms