RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 GREB1LQ9C091 1923 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 MDC1Q14676 2089 aaKnown RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 CAPN5O15484 640 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 CBX6O95503 412 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 THEGLP0DJG4 465 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 PEPDP12955 493 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 ZNF8P17098 575 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 SLC6A4P31645 630 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 ACSL1P33121 698 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 CDKN1CP49918 316 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 GATMP50440 423 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 KCNJ11Q14654 390 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 ARHGAP22Q7Z5H3 698 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 Q8N9G6 341 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 OR5T2Q8NGG2 359 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 SLC22A8Q8TCC7 542 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 ZFPM2Q8WW38 1151 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 TMEM45AQ9NWC5 275 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 FAM120CQ9NX05 1096 aaKnown RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 LIPT1Q9Y234 373 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 RPL36Q9Y3U8 105 aaKnown RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 TEX264Q9Y6I9 313 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 IQCF5A8MTL0 148 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 HHLA1C9JL84 531 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 MPPED1O15442 326 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 ABCB7O75027 752 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 FESP07332 822 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 MATN1P21941 496 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 NR0B2Q15466 257 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 YOD1Q5VVQ6 348 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 GPR107Q5VW38 600 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 GALNT5Q7Z7M9 940 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 KLK6Q92876 244 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 GCDHQ92947 438 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 PEX16Q9Y5Y5 336 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 USP3Q9Y6I4 520 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 SCGB1D2O95969 90 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 EPCAMP16422 314 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 CD38P28907 300 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 ALKAL1Q6UXT8 129 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 ZNF782Q6ZMW2 699 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 YIPF7Q8N8F6 280 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 CPT1CQ8TCG5 803 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 FRS2Q8WU20 508 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 HDAC2Q92769 488 aaKnown RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 CD180Q99467 661 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 KLF16Q9BXK1 252 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 TBC1D17Q9HA65 648 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 ZFC3H1O60293 1989 aaKnown RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 PCDH7O60245 1069 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 SLBPQ14493 270 aaKnown RBP eCLIP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 RHEBQ15382 184 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 TIFABQ6ZNK6 161 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 S100A7AQ86SG5 101 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 DEFB123Q8N688 67 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 C2CD4AQ8NCU7 369 aaPredicted RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 GFM1Q96RP9 751 aaKnown RBP8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 C19orf43Q9BQ61 176 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 OARD1Q9Y530 152 aa8.02□□□□□ -1.13
PCDHB1-201ENST00000306549 ABCA7Q8IZY2 2146 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 CD40LGP29965 261 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 TARDBPQ13148 414 aaKnown RBP eCLIP8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 ZNF550Q7Z398 422 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 THAP6Q8TBB0 222 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 HIPK2Q9H2X6 1198 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 UBE2ZQ9H832 354 aaPredicted RBP8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 ANKRA2Q9H9E1 313 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 C11orf16Q9NQ32 467 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 PCDHGB6Q9Y5F9 930 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 DOCK4Q8N1I0 1966 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 A0A1B0GTW7 788 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 CDC7O00311 574 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 CDH12P55289 794 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 UBE2NP61088 152 aaKnown RBP8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 SLC25A3Q00325 362 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 CBLBQ13191 982 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 TIGD4Q8IY51 512 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 OR6C2Q9NZP2 312 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 TEX13DA0A0J9YY54 714 aaPredicted RBP8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 ISPDA4D126 451 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 BHMG1C9JSJ3 638 aaPredicted RBP8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 ALDOAP04075 364 aaKnown RBP8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 OR12D2P58182 307 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 BNIP3Q12983 259 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 PLGLAQ15195 96 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 QPCTQ16769 361 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 PLEKHN1Q494U1 663 aaPredicted RBP8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 OGFRL1Q5TC84 451 aaPredicted RBP8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 SLC2A7Q6PXP3 512 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 ANKK1Q8NFD2 765 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 HOXD1Q9GZZ0 328 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 B4GALT6Q9UBX8 382 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 PLCL2Q9UPR0 1127 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 PRAMEF33A0A0G2JMD5 474 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 PRAMEF10O60809 474 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 ANGPTL1O95841 491 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 IFNGR1P15260 489 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 BMP8BP34820 402 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 ACVRL1P37023 503 aa8.01□□□□□ -1.13
PCDHB1-201ENST00000306549 BMP8AQ7Z5Y6 402 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms