RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 NLRC5Q86WI3 1866 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 PRR23D1E9PI22 279 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 SLC16A6O15403 523 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 ECI2O75521 394 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 KLF8O95600 359 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 NPPAP01160 153 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 ATXN1LP0C7T5 689 aaKnown RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 PRR23D2P0DMB1 279 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 ADORA3P0DMS8 318 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 FPR1P21462 350 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 NCF4Q15080 339 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 HNRNPA1L2Q32P51 320 aaKnown RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 PROX2Q3B8N5 592 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 TTLL9Q3SXZ7 439 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 C6orf136Q5SQH8 315 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 DOK6Q6PKX4 331 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 TTC9Q92623 222 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 ZNF419Q96HQ0 510 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 FAM129BQ96TA1 746 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 GALPQ9UBC7 116 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 EIF3KQ9UBQ5 218 aaKnown RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 OR51B4Q9Y5P0 310 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 CIB4A0PJX0 185 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 INMT-MINDY4F8WBC2 141 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 CDRT1O95170 752 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 SLC25A14O95258 325 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 PAPSS2O95340 614 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 DHFRP00374 187 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 PROS1P07225 676 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 MMP2P08253 660 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 CACNG1Q06432 222 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 BOP1Q14137 746 aaKnown RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 Q6ZVL8 140 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 SLC46A3Q7Z3Q1 461 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 TSPAN33Q86UF1 283 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 OR2A12Q8NGT7 310 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 ASZ1Q8WWH4 475 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 C11orf54Q9H0W9 315 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 NIPAL2Q9H841 368 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 RPS6KA6Q9UK32 745 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 MGAT4AQ9UM21 535 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 MRPS17Q9Y2R5 130 aaKnown RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 PCDHGB1Q9Y5G3 927 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 LTBP2Q14767 1821 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 A0A0X1KG70 313 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 LEUTXA8MZ59 168 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 SLC22A5O76082 557 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 CPSF4O95639 269 aaKnown RBP10.44□□□□□ -0.74
LSM3-201ENST00000306024 ITGAMP11215 1152 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 RGS6P49758 472 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 CDC42P60953 191 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 NPRL3Q12980 569 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 CAMK2GQ13555 558 aaPredicted RBP10.44□□□□□ -0.74
LSM3-201ENST00000306024 C8orf82Q6P1X6 216 aaPredicted RBP10.44□□□□□ -0.74
LSM3-201ENST00000306024 SERPINA9Q86WD7 417 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 GPSM1Q86YR5 675 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 LAX1Q8IWV1 398 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 OR52J3Q8NH60 311 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ST8SIA2Q92186 375 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 KLK6Q92876 244 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ALG14Q96F25 216 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 OR2A14Q96R47 310 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 PHF7Q9BWX1 381 aaPredicted RBP10.44□□□□□ -0.74
LSM3-201ENST00000306024 KCNK12Q9HB15 430 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ZNF451Q9Y4E5 1061 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 TMEM265A0A087WTH1 108 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 RFPL3O75679 317 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 KELP23276 732 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 AQP1P29972 269 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 COX10Q12887 443 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 SMAD4Q13485 552 aaKnown RBP10.44□□□□□ -0.74
LSM3-201ENST00000306024 KEAP1Q14145 624 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 CHRNA6Q15825 494 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 PLA2G4EQ3MJ16 856 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ZMAT1Q5H9K5 638 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ISCA2Q86U28 154 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ZFAND4Q86XD8 727 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 RBFAQ8N0V3 343 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ZBTB44Q8NCP5 570 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 LRIG1Q96JA1 1093 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ANKRA2Q9H9E1 313 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 MRM3Q9HC36 420 aaKnown RBP10.44□□□□□ -0.74
LSM3-201ENST00000306024 RAD18Q9NS91 495 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 CLN6Q9NWW5 311 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 VAPAQ9P0L0 249 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 EIF2B4Q9UI10 523 aaKnown RBP10.44□□□□□ -0.74
LSM3-201ENST00000306024 MUTYHQ9UIF7 546 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 CA14Q9ULX7 337 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ALG5Q9Y673 324 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 C2CD4DB7Z1M9 353 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 H3BM21 787 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 FCER2P06734 321 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 OR56A5P0C7T3 313 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 PKMP14618 531 aaKnown RBP10.44□□□□□ -0.74
LSM3-201ENST00000306024 ZNF250P15622 560 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 CR2P20023 1033 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 C4BPBP20851 252 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 ENPP1P22413 925 aa10.44□□□□□ -0.74
LSM3-201ENST00000306024 CFL1P23528 166 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms